Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_20465 and PS417_20470 are separated by 268 nucleotides PS417_20470 and PS417_20475 are separated by 123 nucleotides PS417_20475 and PS417_20480 are separated by 209 nucleotides
PS417_20465: PS417_20465 - hypothetical protein, at 4,445,272 to 4,447,272
_20465
PS417_20470: PS417_20470 - hypothetical protein, at 4,447,541 to 4,448,365
_20470
PS417_20475: PS417_20475 - hypothetical protein, at 4,448,489 to 4,449,067
_20475
PS417_20480: PS417_20480 - hypothetical protein, at 4,449,277 to 4,449,549
_20480
Position (kb) 4447
4448
4449 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4446.752 kb on + strand, within PS417_20465 at 4446.752 kb on + strand, within PS417_20465 at 4446.752 kb on + strand, within PS417_20465 at 4446.752 kb on + strand, within PS417_20465 at 4446.930 kb on + strand, within PS417_20465 at 4446.930 kb on + strand, within PS417_20465 at 4446.930 kb on + strand, within PS417_20465 at 4446.930 kb on + strand, within PS417_20465 at 4446.981 kb on + strand, within PS417_20465 at 4446.982 kb on - strand, within PS417_20465 at 4446.982 kb on - strand, within PS417_20465 at 4447.033 kb on + strand, within PS417_20465 at 4447.033 kb on + strand, within PS417_20465 at 4447.034 kb on - strand, within PS417_20465 at 4447.039 kb on + strand, within PS417_20465 at 4447.039 kb on + strand, within PS417_20465 at 4447.039 kb on + strand, within PS417_20465 at 4447.040 kb on - strand, within PS417_20465 at 4447.040 kb on - strand, within PS417_20465 at 4447.110 kb on + strand at 4447.141 kb on + strand at 4447.141 kb on + strand at 4447.141 kb on + strand at 4447.141 kb on + strand at 4447.141 kb on + strand at 4447.141 kb on + strand at 4447.141 kb on + strand at 4447.142 kb on - strand at 4447.142 kb on - strand at 4447.142 kb on - strand at 4447.142 kb on - strand at 4447.142 kb on - strand at 4447.142 kb on - strand at 4447.270 kb on + strand at 4447.317 kb on + strand at 4447.318 kb on - strand at 4447.318 kb on - strand at 4447.334 kb on + strand at 4447.334 kb on + strand at 4447.334 kb on + strand at 4447.334 kb on + strand at 4447.335 kb on - strand at 4447.335 kb on - strand at 4447.335 kb on - strand at 4447.381 kb on + strand at 4447.382 kb on - strand at 4447.416 kb on + strand at 4447.446 kb on - strand at 4447.508 kb on + strand at 4447.694 kb on + strand, within PS417_20470 at 4447.695 kb on - strand, within PS417_20470 at 4447.695 kb on - strand, within PS417_20470 at 4447.730 kb on - strand, within PS417_20470 at 4447.771 kb on + strand, within PS417_20470 at 4447.772 kb on - strand, within PS417_20470 at 4447.837 kb on + strand, within PS417_20470 at 4447.875 kb on + strand, within PS417_20470 at 4447.876 kb on - strand, within PS417_20470 at 4447.876 kb on - strand, within PS417_20470 at 4447.876 kb on - strand, within PS417_20470 at 4447.876 kb on - strand, within PS417_20470 at 4447.924 kb on - strand, within PS417_20470 at 4447.924 kb on - strand, within PS417_20470 at 4447.987 kb on + strand, within PS417_20470 at 4447.996 kb on + strand, within PS417_20470 at 4448.172 kb on + strand, within PS417_20470 at 4448.172 kb on + strand, within PS417_20470 at 4448.172 kb on + strand, within PS417_20470 at 4448.172 kb on + strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.173 kb on - strand, within PS417_20470 at 4448.217 kb on + strand, within PS417_20470 at 4448.217 kb on + strand, within PS417_20470 at 4448.217 kb on + strand, within PS417_20470 at 4448.218 kb on - strand, within PS417_20470 at 4448.218 kb on - strand, within PS417_20470 at 4448.258 kb on + strand, within PS417_20470 at 4448.259 kb on - strand, within PS417_20470 at 4448.284 kb on + strand at 4448.358 kb on + strand at 4448.358 kb on + strand at 4448.373 kb on + strand at 4448.374 kb on - strand at 4448.374 kb on - strand at 4448.396 kb on + strand at 4448.397 kb on - strand at 4448.417 kb on + strand at 4448.426 kb on + strand at 4448.426 kb on + strand at 4448.430 kb on + strand at 4448.430 kb on + strand at 4448.431 kb on - strand at 4448.455 kb on + strand at 4448.455 kb on + strand at 4448.455 kb on + strand at 4448.455 kb on + strand at 4448.455 kb on + strand at 4448.456 kb on - strand at 4448.459 kb on + strand at 4448.459 kb on + strand at 4448.459 kb on + strand at 4448.459 kb on + strand at 4448.459 kb on + strand at 4448.459 kb on + strand at 4448.460 kb on - strand at 4448.460 kb on - strand at 4448.460 kb on - strand at 4448.490 kb on + strand at 4448.491 kb on - strand at 4448.623 kb on + strand, within PS417_20475 at 4448.623 kb on + strand, within PS417_20475 at 4448.623 kb on + strand, within PS417_20475 at 4448.624 kb on - strand, within PS417_20475 at 4448.844 kb on + strand, within PS417_20475 at 4448.844 kb on + strand, within PS417_20475 at 4448.845 kb on - strand, within PS417_20475 at 4448.848 kb on + strand, within PS417_20475 at 4448.848 kb on + strand, within PS417_20475 at 4448.850 kb on + strand, within PS417_20475 at 4448.855 kb on + strand, within PS417_20475 at 4448.859 kb on + strand, within PS417_20475 at 4448.860 kb on - strand, within PS417_20475 at 4448.932 kb on + strand, within PS417_20475 at 4449.140 kb on + strand at 4449.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 4,446,752 + PS417_20465 0.74 +1.6 4,446,752 + PS417_20465 0.74 +0.2 4,446,752 + PS417_20465 0.74 +0.5 4,446,752 + PS417_20465 0.74 +1.4 4,446,930 + PS417_20465 0.83 -1.5 4,446,930 + PS417_20465 0.83 -0.2 4,446,930 + PS417_20465 0.83 +1.4 4,446,930 + PS417_20465 0.83 +1.0 4,446,981 + PS417_20465 0.85 -0.1 4,446,982 - PS417_20465 0.85 -2.2 4,446,982 - PS417_20465 0.85 +0.3 4,447,033 + PS417_20465 0.88 +0.6 4,447,033 + PS417_20465 0.88 +1.4 4,447,034 - PS417_20465 0.88 -2.0 4,447,039 + PS417_20465 0.88 -0.6 4,447,039 + PS417_20465 0.88 +0.1 4,447,039 + PS417_20465 0.88 -2.5 4,447,040 - PS417_20465 0.88 -0.8 4,447,040 - PS417_20465 0.88 +0.7 4,447,110 + +0.4 4,447,141 + +1.0 4,447,141 + -0.0 4,447,141 + -0.6 4,447,141 + -1.4 4,447,141 + +0.4 4,447,141 + -0.0 4,447,141 + -0.1 4,447,142 - -0.9 4,447,142 - -2.4 4,447,142 - +1.0 4,447,142 - +0.0 4,447,142 - +0.0 4,447,142 - +0.6 4,447,270 + +0.2 4,447,317 + +4.1 4,447,318 - -1.7 4,447,318 - -1.9 4,447,334 + +0.6 4,447,334 + +0.5 4,447,334 + -1.6 4,447,334 + +0.1 4,447,335 - -0.5 4,447,335 - -1.9 4,447,335 - +1.4 4,447,381 + -2.0 4,447,382 - -1.0 4,447,416 + +2.1 4,447,446 - -2.8 4,447,508 + +1.1 4,447,694 + PS417_20470 0.19 +0.1 4,447,695 - PS417_20470 0.19 +0.9 4,447,695 - PS417_20470 0.19 +2.3 4,447,730 - PS417_20470 0.23 +0.5 4,447,771 + PS417_20470 0.28 +2.6 4,447,772 - PS417_20470 0.28 +1.8 4,447,837 + PS417_20470 0.36 +2.2 4,447,875 + PS417_20470 0.40 -0.3 4,447,876 - PS417_20470 0.41 -3.6 4,447,876 - PS417_20470 0.41 +0.5 4,447,876 - PS417_20470 0.41 -0.5 4,447,876 - PS417_20470 0.41 +0.2 4,447,924 - PS417_20470 0.46 -3.6 4,447,924 - PS417_20470 0.46 -0.0 4,447,987 + PS417_20470 0.54 +0.4 4,447,996 + PS417_20470 0.55 -1.0 4,448,172 + PS417_20470 0.76 -1.4 4,448,172 + PS417_20470 0.76 -1.0 4,448,172 + PS417_20470 0.76 +0.3 4,448,172 + PS417_20470 0.76 -1.4 4,448,173 - PS417_20470 0.77 +1.2 4,448,173 - PS417_20470 0.77 -0.2 4,448,173 - PS417_20470 0.77 +1.8 4,448,173 - PS417_20470 0.77 -2.0 4,448,173 - PS417_20470 0.77 +1.8 4,448,173 - PS417_20470 0.77 -3.1 4,448,173 - PS417_20470 0.77 +1.3 4,448,217 + PS417_20470 0.82 -2.4 4,448,217 + PS417_20470 0.82 +1.7 4,448,217 + PS417_20470 0.82 +0.4 4,448,218 - PS417_20470 0.82 +3.8 4,448,218 - PS417_20470 0.82 -0.4 4,448,258 + PS417_20470 0.87 -0.4 4,448,259 - PS417_20470 0.87 +0.3 4,448,284 + -0.6 4,448,358 + -0.6 4,448,358 + +0.2 4,448,373 + +0.4 4,448,374 - +1.7 4,448,374 - +0.4 4,448,396 + +1.8 4,448,397 - +0.4 4,448,417 + +0.3 4,448,426 + -2.2 4,448,426 + -1.4 4,448,430 + -2.1 4,448,430 + -3.1 4,448,431 - +1.3 4,448,455 + +0.4 4,448,455 + +0.6 4,448,455 + -3.7 4,448,455 + -0.7 4,448,455 + +0.2 4,448,456 - -0.2 4,448,459 + -1.4 4,448,459 + -0.3 4,448,459 + -1.1 4,448,459 + +1.5 4,448,459 + -0.4 4,448,459 + -2.4 4,448,460 - -3.0 4,448,460 - +0.1 4,448,460 - +1.8 4,448,490 + +1.4 4,448,491 - -3.1 4,448,623 + PS417_20475 0.23 -1.0 4,448,623 + PS417_20475 0.23 +1.3 4,448,623 + PS417_20475 0.23 -0.8 4,448,624 - PS417_20475 0.23 +0.1 4,448,844 + PS417_20475 0.61 -1.2 4,448,844 + PS417_20475 0.61 -2.7 4,448,845 - PS417_20475 0.61 -1.3 4,448,848 + PS417_20475 0.62 +0.2 4,448,848 + PS417_20475 0.62 +0.8 4,448,850 + PS417_20475 0.62 +0.7 4,448,855 + PS417_20475 0.63 -0.6 4,448,859 + PS417_20475 0.64 -2.9 4,448,860 - PS417_20475 0.64 -3.3 4,448,932 + PS417_20475 0.77 -0.5 4,449,140 + -1.0 4,449,301 - +0.2
Or see this region's nucleotide sequence