Strain Fitness in Pseudomonas simiae WCS417 around PS417_20450

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,439,444	+				+0.3
4,439,468	+				-3.1
4,439,507	+				+1.5
4,439,547	+				+0.1
4,439,547	+				-0.5
4,439,679	+		PS417_20445	0.11	+2.1
4,439,697	+		PS417_20445	0.14	-1.3
4,439,697	+		PS417_20445	0.14	-2.6
4,439,727	+		PS417_20445	0.17	+1.7
4,439,767	-		PS417_20445	0.22	+0.2
4,439,869	+		PS417_20445	0.34	-0.2
4,439,869	+		PS417_20445	0.34	-2.4
4,439,962	+		PS417_20445	0.45	-2.5
4,439,964	+		PS417_20445	0.45	+2.2
4,439,964	+		PS417_20445	0.45	-0.1
4,439,964	+		PS417_20445	0.45	+1.2
4,439,964	+		PS417_20445	0.45	-0.6
4,439,965	-		PS417_20445	0.45	+0.4
4,439,965	-		PS417_20445	0.45	+0.3
4,439,965	-		PS417_20445	0.45	+1.4
4,440,000	-		PS417_20445	0.49	-0.8
4,440,086	+		PS417_20445	0.60	+1.7
4,440,086	+		PS417_20445	0.60	+1.9
4,440,087	-		PS417_20445	0.60	+3.2
4,440,087	-		PS417_20445	0.60	+0.1
4,440,201	+		PS417_20445	0.73	-3.1
4,440,202	-		PS417_20445	0.73	-1.0
4,440,202	-		PS417_20445	0.73	+0.3
4,440,505	+				-2.9
4,440,505	+				-2.8
4,440,507	+				-0.0
4,440,507	+				-2.2
4,440,508	-				-1.8
4,440,512	+				-1.9
4,440,527	+				+0.3
4,440,631	-		PS417_20450	0.21	+0.3
4,440,631	-		PS417_20450	0.21	-0.6
4,440,633	+		PS417_20450	0.21	-0.2
4,440,633	+		PS417_20450	0.21	-1.6
4,440,634	-		PS417_20450	0.21	+0.4
4,440,634	-				+1.5
4,440,778	-				+2.5
4,440,778	-		PS417_20450	0.37	-0.9
4,440,778	-		PS417_20450	0.37	-0.5
4,440,880	+		PS417_20450	0.47	-2.2
4,440,881	-		PS417_20450	0.48	-1.4
4,440,971	+		PS417_20450	0.57	+1.2
4,440,971	+		PS417_20450	0.57	-1.4
4,440,972	-		PS417_20450	0.57	+0.2
4,441,014	+		PS417_20450	0.62	-2.5
4,441,014	+		PS417_20450	0.62	-0.6
4,441,014	+		PS417_20450	0.62	-1.9
4,441,014	+		PS417_20450	0.62	-0.0
4,441,109	+		PS417_20450	0.72	-0.1
4,441,110	-		PS417_20450	0.72	-1.4
4,441,137	+		PS417_20450	0.75	+0.3
4,441,137	+		PS417_20450	0.75	+0.2
4,441,138	-		PS417_20450	0.75	+0.2
4,441,138	-		PS417_20450	0.75	-2.9
4,441,138	-		PS417_20450	0.75	-0.1
4,441,141	+		PS417_20450	0.75	-1.2
4,441,142	-		PS417_20450	0.76	-0.6
4,441,151	+		PS417_20450	0.77	-0.5
4,441,200	+		PS417_20450	0.82	-1.0
4,441,200	+		PS417_20450	0.82	-0.7
4,441,200	+		PS417_20450	0.82	-0.4
4,441,201	-		PS417_20450	0.82	+0.7
4,441,201	-				-1.0
4,441,201	-		PS417_20450	0.82	-0.3
4,441,218	+		PS417_20450	0.84	-2.2
4,441,219	-		PS417_20450	0.84	-1.9
4,441,219	-		PS417_20450	0.84	-0.1
4,441,411	+				+0.2
4,441,468	-				-0.0
4,441,570	+				+0.3
4,441,571	-				+1.0
4,441,634	-		PS417_20455	0.11	-1.9
4,441,655	-		PS417_20455	0.12	-1.1
4,441,657	+		PS417_20455	0.12	-0.7
4,441,657	+		PS417_20455	0.12	+1.3
4,441,657	+		PS417_20455	0.12	-0.1
4,441,657	+		PS417_20455	0.12	-2.2
4,441,658	-				-1.9
4,441,658	-		PS417_20455	0.13	-1.2
4,441,658	-		PS417_20455	0.13	-0.4
4,441,751	-		PS417_20455	0.19	-1.6
4,441,766	+		PS417_20455	0.20	+0.2
4,441,766	+		PS417_20455	0.20	-0.2
4,441,766	+		PS417_20455	0.20	-1.5
4,441,900	+		PS417_20455	0.30	-2.4
4,441,900	+		PS417_20455	0.30	-2.2
4,441,901	-		PS417_20455	0.30	+0.5
4,441,901	-		PS417_20455	0.30	+1.9
4,441,901	-		PS417_20455	0.30	-0.5
4,441,970	+		PS417_20455	0.35	+0.2
4,441,972	+		PS417_20455	0.36	-1.1
4,441,973	-		PS417_20455	0.36	-1.6
4,442,094	+		PS417_20455	0.45	-1.3
4,442,094	+		PS417_20455	0.45	-1.4
4,442,113	+		PS417_20455	0.46	+0.4
4,442,113	+				-0.6
4,442,114	-		PS417_20455	0.46	+1.4
4,442,176	-		PS417_20455	0.51	-0.1
4,442,344	-		PS417_20455	0.63	-1.3
4,442,344	-		PS417_20455	0.63	-2.2