Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19385 and PS417_19390 are separated by 81 nucleotides PS417_19390 and PS417_19395 are separated by 175 nucleotides
PS417_19385: PS417_19385 - GntR family transcriptional regulator, at 4,200,680 to 4,201,846
_19385
PS417_19390: PS417_19390 - MarR family transcriptional regulator, at 4,201,928 to 4,202,359
_19390
PS417_19395: PS417_19395 - guanine permease, at 4,202,535 to 4,203,881
_19395
Position (kb) 4201
4202
4203 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 4201.026 kb on + strand, within PS417_19385 at 4201.026 kb on + strand, within PS417_19385 at 4201.191 kb on + strand, within PS417_19385 at 4201.378 kb on - strand, within PS417_19385 at 4201.452 kb on - strand, within PS417_19385 at 4201.452 kb on - strand, within PS417_19385 at 4201.503 kb on + strand, within PS417_19385 at 4201.504 kb on - strand, within PS417_19385 at 4201.545 kb on + strand, within PS417_19385 at 4201.546 kb on - strand, within PS417_19385 at 4201.919 kb on + strand at 4201.928 kb on - strand at 4202.506 kb on - strand at 4202.512 kb on - strand at 4202.512 kb on - strand at 4202.682 kb on + strand, within PS417_19395 at 4202.682 kb on + strand, within PS417_19395 at 4202.682 kb on + strand, within PS417_19395 at 4202.682 kb on + strand, within PS417_19395 at 4202.683 kb on - strand, within PS417_19395 at 4202.850 kb on + strand, within PS417_19395 at 4202.851 kb on - strand, within PS417_19395 at 4202.875 kb on - strand at 4202.906 kb on + strand, within PS417_19395 at 4202.907 kb on - strand, within PS417_19395 at 4203.151 kb on - strand, within PS417_19395 at 4203.151 kb on - strand, within PS417_19395 at 4203.228 kb on + strand, within PS417_19395 at 4203.228 kb on + strand, within PS417_19395 at 4203.228 kb on + strand, within PS417_19395 at 4203.228 kb on + strand, within PS417_19395 at 4203.228 kb on + strand, within PS417_19395 at 4203.229 kb on - strand, within PS417_19395 at 4203.229 kb on - strand, within PS417_19395 at 4203.229 kb on - strand, within PS417_19395
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 4,201,026 + PS417_19385 0.30 -0.0 4,201,026 + PS417_19385 0.30 -0.5 4,201,191 + PS417_19385 0.44 -0.4 4,201,378 - PS417_19385 0.60 -0.0 4,201,452 - PS417_19385 0.66 -1.7 4,201,452 - PS417_19385 0.66 +0.7 4,201,503 + PS417_19385 0.71 -0.9 4,201,504 - PS417_19385 0.71 -2.7 4,201,545 + PS417_19385 0.74 +2.2 4,201,546 - PS417_19385 0.74 -4.1 4,201,919 + -0.7 4,201,928 - +2.9 4,202,506 - +1.0 4,202,512 - -2.1 4,202,512 - -0.7 4,202,682 + PS417_19395 0.11 -0.7 4,202,682 + PS417_19395 0.11 -0.3 4,202,682 + PS417_19395 0.11 +0.1 4,202,682 + PS417_19395 0.11 +0.9 4,202,683 - PS417_19395 0.11 +1.5 4,202,850 + PS417_19395 0.23 +0.4 4,202,851 - PS417_19395 0.23 +1.2 4,202,875 - +2.3 4,202,906 + PS417_19395 0.28 +1.4 4,202,907 - PS417_19395 0.28 -1.4 4,203,151 - PS417_19395 0.46 +1.8 4,203,151 - PS417_19395 0.46 +2.5 4,203,228 + PS417_19395 0.51 +1.4 4,203,228 + PS417_19395 0.51 -0.1 4,203,228 + PS417_19395 0.51 -2.8 4,203,228 + PS417_19395 0.51 -0.4 4,203,228 + PS417_19395 0.51 -2.3 4,203,229 - PS417_19395 0.52 -2.9 4,203,229 - PS417_19395 0.52 -2.3 4,203,229 - PS417_19395 0.52 +0.7
Or see this region's nucleotide sequence