Strain Fitness in Pseudomonas simiae WCS417 around PS417_19380

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,199,401	-		PS417_19375	0.37	-1.7
4,199,401	-		PS417_19375	0.37	-1.5
4,199,738	+		PS417_19375	0.75	+0.1
4,199,738	+		PS417_19375	0.75	+1.1
4,199,738	+		PS417_19375	0.75	-0.2
4,199,738	+		PS417_19375	0.75	-1.6
4,199,738	+		PS417_19375	0.75	-3.0
4,199,739	-		PS417_19375	0.75	+0.8
4,199,739	-		PS417_19375	0.75	-1.6
4,199,739	-		PS417_19375	0.75	-1.4
4,199,739	-		PS417_19375	0.75	-2.6
4,199,739	-		PS417_19375	0.75	+0.2
4,199,960	+				-0.7
4,199,961	-				-0.7
4,200,086	+				-4.1
4,200,087	-				-4.1
4,200,087	-				-1.9
4,200,087	-				-2.6
4,200,087	-				-3.2
4,200,176	+		PS417_19380	0.18	-3.6
4,200,177	-				+0.5
4,200,182	+		PS417_19380	0.19	-0.3
4,200,182	+		PS417_19380	0.19	-1.9
4,200,182	+		PS417_19380	0.19	-1.6
4,200,182	+		PS417_19380	0.19	-1.0
4,200,183	-		PS417_19380	0.19	-4.0
4,200,183	-		PS417_19380	0.19	-1.6
4,200,183	-		PS417_19380	0.19	-2.8
4,200,183	-		PS417_19380	0.19	+0.8
4,200,183	-		PS417_19380	0.19	-1.1
4,200,183	-		PS417_19380	0.19	-3.0
4,200,183	-		PS417_19380	0.19	-3.2
4,200,183	-		PS417_19380	0.19	-5.1
4,200,183	-		PS417_19380	0.19	-1.4
4,200,183	-		PS417_19380	0.19	-0.0
4,200,183	-		PS417_19380	0.19	-2.6
4,200,224	+		PS417_19380	0.26	-2.4
4,200,225	-		PS417_19380	0.26	-3.3
4,200,294	-		PS417_19380	0.38	-1.4
4,200,294	-		PS417_19380	0.38	+1.6
4,200,294	-				-0.7
4,200,356	+		PS417_19380	0.48	-2.1
4,200,357	-		PS417_19380	0.48	-3.0
4,200,357	-		PS417_19380	0.48	-0.6
4,200,357	-		PS417_19380	0.48	-3.3
4,200,371	+		PS417_19380	0.50	-1.6
4,200,629	+				+1.2
4,200,630	-				+0.3
4,200,647	+				+0.9
4,200,657	-				-1.9
4,200,657	-				-2.4
4,200,665	+				-1.1
4,200,665	+				-1.1
4,200,666	-				-1.9
4,200,908	+		PS417_19385	0.20	-1.7
4,200,909	-		PS417_19385	0.20	+0.5
4,201,026	+		PS417_19385	0.30	-0.0
4,201,026	+		PS417_19385	0.30	-0.5
4,201,191	+		PS417_19385	0.44	-0.4
4,201,378	-		PS417_19385	0.60	-0.0
4,201,452	-		PS417_19385	0.66	-1.7
4,201,452	-		PS417_19385	0.66	+0.7
4,201,503	+		PS417_19385	0.71	-0.9
4,201,504	-		PS417_19385	0.71	-2.7
4,201,545	+		PS417_19385	0.74	+2.2
4,201,546	-		PS417_19385	0.74	-4.1