Strain Fitness in Pseudomonas simiae WCS417 around PS417_18810

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,076,209	+		PS417_18805	0.26	-0.1
4,076,212	+		PS417_18805	0.26	-0.2
4,076,212	+		PS417_18805	0.26	-0.3
4,076,212	+		PS417_18805	0.26	-0.6
4,076,213	-		PS417_18805	0.26	+0.3
4,076,315	-		PS417_18805	0.34	-0.2
4,076,623	+		PS417_18805	0.59	-0.5
4,076,624	-		PS417_18805	0.59	+1.6
4,076,629	+		PS417_18805	0.59	+0.1
4,076,629	+		PS417_18805	0.59	+0.9
4,076,630	-		PS417_18805	0.59	+1.4
4,076,630	-		PS417_18805	0.59	+0.1
4,076,630	-		PS417_18805	0.59	-0.1
4,076,630	-		PS417_18805	0.59	-2.0
4,076,630	-		PS417_18805	0.59	-0.2
4,076,717	-		PS417_18805	0.66	+2.0
4,077,097	+				+2.6
4,077,098	-				+1.5
4,077,284	-		PS417_18810	0.15	+0.7
4,077,306	-		PS417_18810	0.18	+0.2
4,077,306	-		PS417_18810	0.18	+1.1
4,077,306	-		PS417_18810	0.18	+1.7
4,077,575	+				+0.9
4,077,575	+		PS417_18810	0.55	+0.5
4,077,657	-		PS417_18810	0.67	+1.7
4,077,932	-				-0.1
4,077,966	+				-0.3
4,077,967	-				+0.9
4,078,030	+				-0.2
4,078,030	+				-1.1
4,078,030	+				+0.3
4,078,031	-				-2.5
4,078,210	+		PS417_18815	0.29	-0.3
4,078,249	+		PS417_18815	0.35	+0.0
4,078,249	+		PS417_18815	0.35	-1.3
4,078,250	-		PS417_18815	0.35	-1.0
4,078,250	-		PS417_18815	0.35	+0.8
4,078,315	+		PS417_18815	0.46	+0.9
4,078,316	-		PS417_18815	0.46	-3.1
4,078,375	+		PS417_18815	0.55	+0.6
4,078,384	+		PS417_18815	0.57	+0.1
4,078,698	-				-0.1
4,078,698	-				+0.2
4,078,815	-				+0.7
4,078,815	-				+0.9
4,078,846	+		PS417_18820	0.13	+1.1
4,078,846	+		PS417_18820	0.13	+0.9
4,078,846	+		PS417_18820	0.13	+0.6
4,078,847	-		PS417_18820	0.13	-0.7
4,078,847	-		PS417_18820	0.13	-1.7
4,078,849	+		PS417_18820	0.14	+1.3