Strain Fitness in Pseudomonas simiae WCS417 around PS417_17915

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,908,407	-		PS417_17910	0.49	+0.4
3,908,407	-		PS417_17910	0.49	-1.5
3,908,830	+		PS417_17910	0.77	-0.7
3,908,830	+		PS417_17910	0.77	+1.6
3,908,831	-		PS417_17910	0.77	+2.6
3,908,922	+		PS417_17910	0.83	+1.2
3,908,923	-				-0.7
3,908,923	-		PS417_17910	0.84	+0.1
3,908,923	-		PS417_17910	0.84	-0.9
3,908,928	+		PS417_17910	0.84	+2.1
3,908,929	-		PS417_17910	0.84	-1.3
3,909,000	-		PS417_17910	0.89	+0.4
3,909,280	-				-3.7
3,909,382	+				-1.0
3,909,477	+				+0.7
3,909,478	-				-3.6
3,909,478	-				+0.1
3,909,522	+		PS417_17915	0.10	-0.2
3,909,643	-		PS417_17915	0.19	+0.1
3,909,794	-		PS417_17915	0.31	+1.2
3,909,912	+		PS417_17915	0.40	-0.7
3,909,912	+		PS417_17915	0.40	+2.0
3,909,913	-		PS417_17915	0.40	-3.1
3,909,976	+		PS417_17915	0.45	+2.5
3,909,976	+		PS417_17915	0.45	+0.2
3,909,976	+		PS417_17915	0.45	-3.5
3,910,086	+		PS417_17915	0.53	-0.2
3,910,087	-		PS417_17915	0.53	-2.2
3,910,129	+		PS417_17915	0.56	-2.3
3,910,130	-		PS417_17915	0.56	-1.7
3,910,158	+		PS417_17915	0.58	+0.6
3,910,158	+		PS417_17915	0.58	-0.6
3,910,159	-		PS417_17915	0.58	-1.5
3,910,161	-		PS417_17915	0.59	+1.3
3,910,257	+		PS417_17915	0.66	+1.3
3,910,272	+		PS417_17915	0.67	+1.2
3,910,312	-		PS417_17915	0.70	-0.5
3,910,326	+		PS417_17915	0.71	+1.2
3,910,419	+		PS417_17915	0.78	+0.2
3,910,420	-				-0.2
3,910,504	-		PS417_17915	0.84	-1.3
3,910,615	-				-0.6
3,910,767	+		PS417_17920	0.16	-1.2
3,910,767	+		PS417_17920	0.16	-0.7
3,910,767	+		PS417_17920	0.16	+0.2
3,910,767	+		PS417_17920	0.16	+1.0
3,910,768	-		PS417_17920	0.16	-0.3
3,910,851	+		PS417_17920	0.31	+0.7
3,910,851	+		PS417_17920	0.31	+1.5
3,911,356	+				-1.7
3,911,493	-		PS417_17925	0.18	-1.2