Strain Fitness in Pseudomonas simiae WCS417 around PS417_17785

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,881,701	+				-4.4
3,881,702	-				-2.2
3,881,720	+				-3.2
3,881,724	+				-0.7
3,881,724	+				-1.1
3,881,725	-				-0.4
3,881,725	-				-0.7
3,881,727	+				+0.3
3,882,140	+		PS417_17780	0.58	-1.5
3,882,141	-		PS417_17780	0.58	+1.5
3,882,410	+				-0.3
3,882,421	+				+0.2
3,882,476	+				+1.7
3,882,477	-				+1.6
3,882,477	-				-2.0
3,882,489	+				+0.6
3,882,490	-				-0.9
3,882,494	-				-0.2
3,882,508	+				-3.2
3,882,509	-				+1.4
3,882,509	-				+2.8
3,882,555	+				+1.3
3,882,556	-				+0.4
3,882,575	-				-1.5
3,882,626	+				-0.6
3,882,626	+				+0.9
3,882,627	-				-0.4
3,882,627	-				-3.0
3,883,177	+				-1.7
3,883,178	-				-0.2
3,883,540	+		PS417_17785	0.57	+1.6
3,883,540	+		PS417_17785	0.57	+1.2
3,883,541	-		PS417_17785	0.57	-2.0
3,883,541	-		PS417_17785	0.57	+1.2
3,883,584	+				+0.8
3,883,584	+		PS417_17785	0.60	+2.4
3,883,585	-		PS417_17785	0.60	+0.2
3,883,585	-		PS417_17785	0.60	+1.0
3,883,585	-		PS417_17785	0.60	+0.6
3,883,585	-		PS417_17785	0.60	-1.2
3,883,684	+		PS417_17785	0.66	-1.3
3,883,708	+		PS417_17785	0.67	+2.1
3,884,017	+		PS417_17785	0.86	+1.1
3,884,018	-		PS417_17785	0.86	-0.2
3,884,018	-		PS417_17785	0.86	+2.4
3,884,054	-		PS417_17785	0.88	-3.5
3,884,066	+		PS417_17785	0.89	-0.9
3,884,067	-		PS417_17785	0.89	+0.6
3,884,138	+				+0.2
3,884,206	+				+0.5
3,884,209	+				-3.8
3,884,209	+				+3.2
3,884,210	-				+1.2
3,884,258	+				-4.1
3,884,322	+				-0.8
3,884,322	+				-0.5
3,884,397	-				+0.5
3,884,558	+				+0.4
3,884,559	-				+1.9
3,884,600	-				-1.1
3,884,618	-				-1.7
3,884,618	-				+1.0
3,884,628	+				+0.6
3,884,629	-				-0.5
3,884,688	+		PS417_17790	0.17	-0.1
3,884,688	+		PS417_17790	0.17	-1.5
3,884,688	+		PS417_17790	0.17	-2.6
3,884,688	+				+0.9
3,884,689	-		PS417_17790	0.17	+0.4
3,884,832	-		PS417_17790	0.37	-0.1
3,884,893	-		PS417_17790	0.45	+1.1
3,885,047	+		PS417_17790	0.67	+1.1
3,885,048	-		PS417_17790	0.67	+0.9
3,885,192	-		PS417_17790	0.87	+2.2
3,885,223	+				-0.7
3,885,224	-				+0.4