Strain Fitness in Pseudomonas simiae WCS417 around PS417_16230

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,555,422	-		PS417_16220	0.36	+0.6
3,555,681	+				+0.0
3,555,681	+				+0.3
3,556,043	+		PS417_16225	0.54	-1.6
3,556,043	+		PS417_16225	0.54	+0.4
3,556,044	-		PS417_16225	0.55	-0.1
3,556,198	+		PS417_16225	0.74	-0.8
3,556,198	+		PS417_16225	0.74	-1.3
3,556,198	+		PS417_16225	0.74	-0.5
3,556,199	-		PS417_16225	0.74	-0.5
3,556,199	-		PS417_16225	0.74	-2.2
3,556,202	+		PS417_16225	0.74	-1.9
3,556,202	+		PS417_16225	0.74	-1.6
3,556,203	-		PS417_16225	0.74	+1.3
3,556,205	+		PS417_16225	0.75	-1.9
3,556,230	-				-0.9
3,556,259	+		PS417_16225	0.81	-0.8
3,556,373	+				-0.4
3,556,373	+				-3.9
3,556,373	+				-1.3
3,556,374	-				+0.6
3,556,374	-				+1.3
3,556,374	-				-1.6
3,556,402	-				-0.9
3,556,488	+				+0.9
3,556,489	-				-2.1
3,556,532	+				-0.9
3,556,567	+		PS417_16230	0.17	-0.2
3,556,567	+		PS417_16230	0.17	-0.9
3,556,568	-		PS417_16230	0.17	+0.3
3,556,571	-		PS417_16230	0.18	-3.8
3,556,614	+		PS417_16230	0.23	-0.0
3,556,634	-		PS417_16230	0.25	-1.6
3,556,688	-		PS417_16230	0.31	-0.1
3,556,688	-		PS417_16230	0.31	-1.7
3,556,688	-		PS417_16230	0.31	-2.1
3,556,740	+		PS417_16230	0.37	+0.7
3,556,741	-		PS417_16230	0.37	+0.3
3,556,805	+		PS417_16230	0.45	+1.0
3,556,858	+		PS417_16230	0.51	+0.3
3,556,861	-		PS417_16230	0.51	-0.6
3,556,887	+		PS417_16230	0.54	+0.1
3,557,125	+		PS417_16230	0.82	-2.1
3,557,126	-		PS417_16230	0.82	-0.5
3,557,127	+		PS417_16230	0.82	-2.5
3,557,127	+		PS417_16230	0.82	+0.5
3,557,128	-		PS417_16230	0.82	-0.0
3,557,148	+		PS417_16230	0.84	-1.1
3,557,184	+		PS417_16230	0.88	+0.5
3,557,185	-		PS417_16230	0.88	-2.1
3,557,303	+				-0.3
3,557,316	-				-0.9
3,557,424	+		PS417_16235	0.13	-1.4
3,557,432	+		PS417_16235	0.14	+0.0
3,557,432	+				-1.3
3,557,486	+		PS417_16235	0.19	-0.4
3,557,556	+		PS417_16235	0.25	-1.5
3,557,557	-		PS417_16235	0.25	-2.3
3,557,676	+		PS417_16235	0.36	+0.6
3,557,676	+		PS417_16235	0.36	+0.2
3,557,677	-		PS417_16235	0.36	-0.0
3,557,735	+		PS417_16235	0.41	+0.7
3,557,736	-		PS417_16235	0.41	-1.1
3,557,736	-		PS417_16235	0.41	-1.3
3,557,736	-		PS417_16235	0.41	-0.2
3,557,736	-		PS417_16235	0.41	-0.7
3,557,792	+		PS417_16235	0.47	-0.5
3,557,792	+		PS417_16235	0.47	-0.9
3,557,792	+		PS417_16235	0.47	-0.9
3,557,793	-		PS417_16235	0.47	-1.3
3,558,102	-		PS417_16235	0.75	-0.1