Strain Fitness in Pseudomonas simiae WCS417 around PS417_15990

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,503,112	-				+0.3
3,503,169	-				+2.0
3,503,169	-				-0.6
3,503,169	-				+0.8
3,503,169	-				-0.8
3,503,169	-				-0.9
3,503,249	+				+0.2
3,503,417	-		PS417_15985	0.19	-1.9
3,503,417	-		PS417_15985	0.19	+1.0
3,503,422	+		PS417_15985	0.20	-0.8
3,503,653	+		PS417_15985	0.57	-1.1
3,503,654	-		PS417_15985	0.57	+0.0
3,503,672	-		PS417_15985	0.60	+0.7
3,503,672	-		PS417_15985	0.60	-0.5
3,503,672	-		PS417_15985	0.60	-0.6
3,503,767	+		PS417_15985	0.75	-1.1
3,503,894	-				-0.1
3,504,000	-				-0.9
3,504,076	+				+0.9
3,504,077	-				+0.4
3,504,599	-		PS417_15990	0.39	+0.2
3,504,599	-				+2.3
3,504,599	-		PS417_15990	0.39	-1.6
3,504,669	+		PS417_15990	0.44	-3.3
3,504,793	-				+0.7
3,504,975	+		PS417_15990	0.66	+0.1
3,505,240	-		PS417_15990	0.85	-2.6
3,505,565	+				-0.5
3,505,566	-				-1.3
3,505,787	+		PS417_15995	0.22	+1.0
3,505,788	-		PS417_15995	0.23	-0.6
3,505,788	-		PS417_15995	0.23	+0.1
3,505,789	+		PS417_15995	0.23	+2.7
3,505,789	+		PS417_15995	0.23	-0.1
3,505,790	-		PS417_15995	0.23	-2.1
3,505,790	-		PS417_15995	0.23	+1.3
3,505,790	-		PS417_15995	0.23	+1.7
3,505,893	-		PS417_15995	0.30	-2.6
3,506,196	-		PS417_15995	0.50	+1.5