Strain Fitness in Pseudomonas simiae WCS417 around PS417_15725

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,447,117	+		PS417_15720	0.80	+0.2
3,447,118	-				+1.7
3,447,201	+		PS417_15720	0.83	-2.4
3,447,210	+		PS417_15720	0.83	-0.0
3,447,210	+		PS417_15720	0.83	+0.7
3,447,210	+		PS417_15720	0.83	+0.5
3,447,211	-		PS417_15720	0.83	-1.5
3,447,211	-		PS417_15720	0.83	-0.4
3,447,246	+		PS417_15720	0.84	+1.0
3,447,264	+		PS417_15720	0.84	-0.7
3,447,265	-		PS417_15720	0.84	+0.7
3,447,265	-		PS417_15720	0.84	-0.2
3,447,417	+		PS417_15720	0.88	-0.1
3,447,549	+				-0.0
3,447,550	-				+0.3
3,447,555	+				-0.1
3,447,555	+				+0.6
3,447,555	+				+0.9
3,447,555	+				-0.6
3,447,556	-				-3.4
3,447,556	-				-0.1
3,447,556	-				-0.1
3,447,556	-				+0.7
3,447,564	+				-1.3
3,447,564	+				+0.2
3,447,652	+				-4.2
3,447,653	-				+0.9
3,447,653	-				+0.2
3,447,672	+				-1.9
3,447,672	+				+0.7
3,447,672	+				-0.0
3,448,534	-		PS417_15725	0.44	+3.1
3,448,534	-		PS417_15725	0.44	+0.4
3,448,534	-		PS417_15725	0.44	+0.2
3,449,046	+		PS417_15725	0.81	-0.7
3,449,046	+		PS417_15725	0.81	+2.5
3,449,047	-		PS417_15725	0.81	+0.9
3,449,375	+				+0.9
3,449,408	+				+0.8
3,449,555	+		PS417_15730	0.19	-0.9
3,449,555	+		PS417_15730	0.19	+2.4
3,449,867	+				-1.7
3,449,868	-		PS417_15730	0.44	-2.8
3,449,868	-		PS417_15730	0.44	-0.6
3,449,870	+		PS417_15730	0.44	-2.5
3,449,870	+		PS417_15730	0.44	-1.3
3,449,871	-		PS417_15730	0.44	-0.1
3,449,871	-		PS417_15730	0.44	-0.3
3,449,900	+		PS417_15730	0.47	+0.3
3,449,900	+		PS417_15730	0.47	-0.4
3,449,921	+		PS417_15730	0.48	+0.4
3,450,275	+		PS417_15730	0.77	-1.2
3,450,275	+		PS417_15730	0.77	+0.4
3,450,287	+		PS417_15730	0.78	+0.6
3,450,299	+		PS417_15730	0.78	-2.9