Strain Fitness in Pseudomonas simiae WCS417 around PS417_15395

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,375,635	+				+0.8
3,375,693	-				-0.0
3,375,696	+				-2.5
3,375,697	-				-1.4
3,375,733	-		PS417_15390	0.12	-2.6
3,375,762	-		PS417_15390	0.21	-3.5
3,375,762	-				-0.4
3,375,762	-				-1.0
3,375,762	-		PS417_15390	0.21	-1.7
3,375,795	-		PS417_15390	0.30	+0.9
3,376,235	+		PS417_15395	0.26	-2.7
3,376,235	+		PS417_15395	0.26	-2.2
3,376,235	+		PS417_15395	0.26	-2.5
3,376,236	-		PS417_15395	0.26	-2.8
3,376,236	-		PS417_15395	0.26	+0.2
3,376,236	-		PS417_15395	0.26	-0.2
3,376,373	+		PS417_15395	0.47	-0.4
3,376,526	+		PS417_15395	0.71	-0.6
3,376,561	+		PS417_15395	0.76	-0.8
3,376,561	+		PS417_15395	0.76	+0.1
3,376,562	-		PS417_15395	0.76	-0.4
3,376,562	-		PS417_15395	0.76	+0.3
3,376,562	-		PS417_15395	0.76	-0.7
3,376,562	-		PS417_15395	0.76	-0.9
3,376,594	+		PS417_15395	0.81	-1.7
3,376,594	+		PS417_15395	0.81	-0.4
3,376,595	-				+0.2
3,376,595	-		PS417_15395	0.82	+0.6
3,376,595	-		PS417_15395	0.82	-1.0
3,376,612	+		PS417_15395	0.84	-2.8
3,376,613	-		PS417_15395	0.84	-0.4
3,376,833	-				+2.0
3,376,891	+		PS417_15400	0.17	+0.1
3,376,921	-		PS417_15400	0.28	+2.6
3,377,093	+				+0.5
3,377,160	-		PS417_15405	0.11	-2.7
3,377,180	-		PS417_15405	0.14	+0.3
3,377,419	+		PS417_15405	0.53	+0.6
3,377,420	-		PS417_15405	0.53	-0.5
3,377,493	-		PS417_15405	0.65	+0.9
3,377,536	+		PS417_15405	0.72	-0.3
3,377,684	+				+1.2
3,377,685	-				-0.1
3,377,685	-				+0.9
3,377,685	-				+0.6
3,377,688	+				+1.1
3,377,688	+				+0.2
3,377,688	+				-1.1
3,377,689	-				+1.3
3,377,689	-				-0.2
3,377,689	-				+0.4
3,377,699	+				+2.1
3,377,699	+				+2.5
3,377,700	-				+1.2