Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01515 and PS417_01520 are separated by 175 nucleotides PS417_01520 and PS417_01525 are separated by 87 nucleotides
PS417_01515: PS417_01515 - alpha/beta hydrolase, at 335,633 to 336,577
_01515
PS417_01520: PS417_01520 - arsenic resistance protein, at 336,753 to 337,718
_01520
PS417_01525: PS417_01525 - membrane protein, at 337,806 to 339,398
_01525
Position (kb) 336
337
338 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 335.795 kb on + strand at 335.796 kb on - strand, within PS417_01515 at 335.796 kb on - strand, within PS417_01515 at 335.844 kb on + strand, within PS417_01515 at 335.845 kb on - strand, within PS417_01515 at 335.852 kb on + strand, within PS417_01515 at 335.870 kb on + strand, within PS417_01515 at 335.941 kb on + strand, within PS417_01515 at 336.223 kb on + strand, within PS417_01515 at 336.224 kb on - strand, within PS417_01515 at 336.373 kb on - strand, within PS417_01515 at 336.649 kb on + strand at 336.717 kb on - strand at 336.717 kb on - strand at 336.752 kb on + strand at 336.753 kb on - strand at 336.894 kb on + strand, within PS417_01520 at 336.894 kb on + strand, within PS417_01520 at 337.004 kb on - strand, within PS417_01520 at 337.063 kb on + strand, within PS417_01520 at 337.067 kb on - strand, within PS417_01520 at 337.067 kb on - strand, within PS417_01520 at 337.086 kb on + strand, within PS417_01520 at 337.185 kb on + strand, within PS417_01520 at 337.185 kb on + strand, within PS417_01520 at 337.185 kb on + strand, within PS417_01520 at 337.289 kb on - strand, within PS417_01520 at 337.455 kb on + strand, within PS417_01520 at 337.455 kb on + strand, within PS417_01520 at 337.455 kb on + strand, within PS417_01520 at 337.674 kb on + strand at 337.674 kb on + strand at 337.773 kb on + strand at 337.773 kb on + strand at 337.773 kb on + strand at 337.774 kb on - strand at 337.774 kb on - strand at 337.774 kb on - strand at 337.789 kb on - strand at 337.840 kb on + strand at 338.250 kb on + strand, within PS417_01525 at 338.250 kb on + strand, within PS417_01525 at 338.368 kb on - strand, within PS417_01525 at 338.368 kb on - strand, within PS417_01525 at 338.431 kb on + strand, within PS417_01525
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 335,795 + -0.1 335,796 - PS417_01515 0.17 -0.1 335,796 - PS417_01515 0.17 -3.7 335,844 + PS417_01515 0.22 +0.4 335,845 - PS417_01515 0.22 -1.1 335,852 + PS417_01515 0.23 +1.5 335,870 + PS417_01515 0.25 -1.5 335,941 + PS417_01515 0.33 -0.5 336,223 + PS417_01515 0.62 +0.0 336,224 - PS417_01515 0.63 -0.5 336,373 - PS417_01515 0.78 -1.9 336,649 + +0.3 336,717 - -1.0 336,717 - +0.5 336,752 + +0.6 336,753 - +0.6 336,894 + PS417_01520 0.15 -0.6 336,894 + PS417_01520 0.15 +0.8 337,004 - PS417_01520 0.26 -2.1 337,063 + PS417_01520 0.32 -0.3 337,067 - PS417_01520 0.33 -0.3 337,067 - PS417_01520 0.33 -3.3 337,086 + PS417_01520 0.34 -0.0 337,185 + PS417_01520 0.45 -1.1 337,185 + PS417_01520 0.45 +0.0 337,185 + PS417_01520 0.45 -0.5 337,289 - PS417_01520 0.55 -0.1 337,455 + PS417_01520 0.73 -1.7 337,455 + PS417_01520 0.73 +0.2 337,455 + PS417_01520 0.73 -0.9 337,674 + -2.9 337,674 + -1.2 337,773 + +0.7 337,773 + -0.3 337,773 + +0.5 337,774 - +1.5 337,774 - +0.1 337,774 - -0.4 337,789 - -0.1 337,840 + -1.0 338,250 + PS417_01525 0.28 -3.8 338,250 + PS417_01525 0.28 +1.2 338,368 - PS417_01525 0.35 +0.5 338,368 - PS417_01525 0.35 -0.4 338,431 + PS417_01525 0.39 -1.1
Or see this region's nucleotide sequence