Strain Fitness in Pseudomonas simiae WCS417 around PS417_14915

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,256,096	+				+2.2
3,256,290	-		PS417_14910	0.29	-0.6
3,256,290	-		PS417_14910	0.29	-3.2
3,256,322	+		PS417_14910	0.32	+1.0
3,256,323	-		PS417_14910	0.32	+0.2
3,256,356	-		PS417_14910	0.36	-3.1
3,256,356	-		PS417_14910	0.36	+0.3
3,256,409	+		PS417_14910	0.41	-0.5
3,256,486	+		PS417_14910	0.49	-3.7
3,256,486	+		PS417_14910	0.49	-1.7
3,256,568	+		PS417_14910	0.57	+0.9
3,256,680	-		PS417_14910	0.68	+1.4
3,256,700	+		PS417_14910	0.71	-1.0
3,256,700	+		PS417_14910	0.71	-0.5
3,256,700	+		PS417_14910	0.71	+0.9
3,256,700	+		PS417_14910	0.71	+0.2
3,257,005	+				-2.2
3,257,005	+				+0.4
3,257,005	+				+0.5
3,257,005	+				+1.4
3,257,006	-				-0.8
3,257,451	+		PS417_14915	0.44	+0.1
3,257,451	+		PS417_14915	0.44	-2.7
3,257,451	+		PS417_14915	0.44	-3.3
3,257,891	-				+1.3
3,257,896	+				+0.7
3,257,927	+				-0.3
3,257,927	+				-0.3
3,257,928	-				+2.7
3,257,929	+				+0.7
3,257,929	+				-0.1
3,257,930	-				+0.5
3,257,930	-				-3.3
3,257,930	-				-1.5
3,257,930	-				-3.6
3,257,930	-				-0.4
3,257,930	-				+0.2
3,257,930	-				-1.4
3,257,930	-				+0.2
3,257,930	-				-0.6
3,258,416	+		PS417_14920	0.41	+0.8
3,258,417	-		PS417_14920	0.41	-1.7
3,258,474	-		PS417_14920	0.46	-2.4
3,258,476	+		PS417_14920	0.46	+3.3
3,258,476	+		PS417_14920	0.46	-2.0
3,258,590	+		PS417_14920	0.56	+0.5
3,258,590	+		PS417_14920	0.56	-0.2
3,258,590	+		PS417_14920	0.56	-0.4
3,258,590	+		PS417_14920	0.56	+0.2
3,258,590	+		PS417_14920	0.56	-2.0
3,258,590	+		PS417_14920	0.56	-1.6
3,258,591	-		PS417_14920	0.56	-1.7
3,258,591	-		PS417_14920	0.56	+0.3
3,258,591	-		PS417_14920	0.56	-0.2
3,258,591	-		PS417_14920	0.56	+1.9
3,258,591	-		PS417_14920	0.56	+0.3
3,258,591	-		PS417_14920	0.56	+0.6
3,258,591	-		PS417_14920	0.56	+0.4
3,258,591	-		PS417_14920	0.56	-2.8
3,258,841	+		PS417_14920	0.77	-0.2