Strain Fitness in Pseudomonas simiae WCS417 around PS417_00145

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
30,687	+		PS417_00140	0.49	+0.4
30,687	+		PS417_00140	0.49	+2.5
30,705	+		PS417_00140	0.50	+0.5
30,706	-		PS417_00140	0.50	-1.9
30,706	-		PS417_00140	0.50	-0.1
30,763	-		PS417_00140	0.54	-0.1
30,817	+		PS417_00140	0.57	-2.8
30,817	+				+4.0
30,827	+		PS417_00140	0.58	-1.1
30,827	+		PS417_00140	0.58	-0.3
30,827	+		PS417_00140	0.58	-2.0
30,827	+		PS417_00140	0.58	-1.5
30,828	-		PS417_00140	0.58	-2.3
30,828	-		PS417_00140	0.58	-1.1
30,828	-		PS417_00140	0.58	-0.1
30,874	-		PS417_00140	0.61	-1.8
30,952	-		PS417_00140	0.66	-0.5
30,952	-		PS417_00140	0.66	-1.7
30,952	-		PS417_00140	0.66	+0.2
31,105	-		PS417_00140	0.76	-0.8
31,206	+		PS417_00140	0.83	-0.5
31,206	+		PS417_00140	0.83	-1.1
31,215	+		PS417_00140	0.83	-0.9
31,215	+		PS417_00140	0.83	-0.7
31,215	+		PS417_00140	0.83	+0.3
31,216	-		PS417_00140	0.83	-1.5
31,216	-		PS417_00140	0.83	-1.4
31,216	-		PS417_00140	0.83	-0.3
31,216	-		PS417_00140	0.83	-0.2
31,329	+				-1.7
31,401	+				+1.4
31,402	-				+1.2
31,925	+		PS417_00145	0.37	-0.2
31,948	+		PS417_00145	0.40	+0.2
31,948	+		PS417_00145	0.40	-0.8
31,948	+		PS417_00145	0.40	-0.0
31,948	+		PS417_00145	0.40	+0.7
31,948	+		PS417_00145	0.40	-1.5
31,948	+		PS417_00145	0.40	-0.7
31,948	+		PS417_00145	0.40	+3.1
31,949	-		PS417_00145	0.40	-1.1
31,949	-		PS417_00145	0.40	-1.3
32,256	+		PS417_00145	0.72	+0.7
32,256	+		PS417_00145	0.72	+0.1
32,256	+		PS417_00145	0.72	-0.4
32,256	+		PS417_00145	0.72	-2.3
32,256	+		PS417_00145	0.72	+0.1
32,257	-		PS417_00145	0.72	+0.1
32,257	-		PS417_00145	0.72	+0.1
32,391	+		PS417_00145	0.86	+2.4
32,391	+		PS417_00145	0.86	-1.0
32,391	+		PS417_00145	0.86	+0.1
32,392	-		PS417_00145	0.87	-1.8
32,518	-				+0.6
32,518	-				-0.8
32,559	+				-1.1
32,559	+				+0.3
32,559	+				+0.9
32,559	+				-1.5
32,560	-				+2.2
32,581	-				+1.5
32,581	-				-0.2
32,584	+		PS417_00150	0.10	-0.3
32,584	+		PS417_00150	0.10	+1.2
32,585	-		PS417_00150	0.10	+0.4
32,585	-		PS417_00150	0.10	-2.1
32,728	+		PS417_00150	0.54	-1.8
32,728	+		PS417_00150	0.54	-0.5
32,728	+		PS417_00150	0.54	+3.3
32,729	-		PS417_00150	0.54	-1.8
32,729	-		PS417_00150	0.54	+0.1
32,828	-				-1.1
32,828	-		PS417_00150	0.84	+1.1
32,878	+				-3.7
32,913	-				+0.0
32,934	+				-0.8
32,934	+				+0.8
32,935	-				-1.1
32,940	+				+0.3
32,942	+				+1.5
33,028	+				-0.5
33,028	+				-0.5
33,029	-				+0.6
33,030	+				-0.5
33,297	+		PS417_00155	0.33	-1.1
33,298	-		PS417_00155	0.33	+1.7
33,483	+		PS417_00155	0.53	-1.1
33,499	-		PS417_00155	0.54	+0.7