Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14110 and PS417_14115 are separated by 119 nucleotides PS417_14115 and PS417_14120 are separated by 0 nucleotides PS417_14120 and PS417_14125 are separated by 5 nucleotides
PS417_14110: PS417_14110 - 2-nitropropane dioxygenase, at 3,095,552 to 3,096,613
_14110
PS417_14115: PS417_14115 - molybdate ABC transporter substrate-binding protein, at 3,096,733 to 3,097,491
_14115
PS417_14120: PS417_14120 - molybdenum ABC transporter permease, at 3,097,492 to 3,098,172
_14120
PS417_14125: PS417_14125 - molybdenum ABC transporter ATP-binding protein, at 3,098,178 to 3,099,257
_14125
Position (kb)
3096
3097
3098 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3095.841 kb on - strand, within PS417_14110 at 3095.994 kb on + strand at 3095.994 kb on + strand, within PS417_14110 at 3096.285 kb on - strand, within PS417_14110 at 3096.292 kb on + strand, within PS417_14110 at 3096.561 kb on - strand at 3096.561 kb on - strand at 3096.612 kb on - strand at 3096.643 kb on - strand at 3096.643 kb on - strand at 3096.643 kb on - strand at 3096.664 kb on + strand at 3096.664 kb on + strand at 3096.667 kb on - strand at 3096.674 kb on + strand at 3096.675 kb on - strand at 3096.919 kb on + strand, within PS417_14115 at 3096.953 kb on + strand, within PS417_14115 at 3096.975 kb on + strand, within PS417_14115 at 3097.026 kb on + strand at 3097.026 kb on + strand, within PS417_14115 at 3097.027 kb on - strand, within PS417_14115 at 3097.031 kb on - strand, within PS417_14115 at 3097.073 kb on - strand, within PS417_14115 at 3097.300 kb on + strand, within PS417_14115 at 3097.301 kb on - strand, within PS417_14115 at 3097.302 kb on + strand, within PS417_14115 at 3097.443 kb on + strand at 3097.468 kb on + strand at 3097.469 kb on - strand at 3097.469 kb on - strand at 3097.489 kb on + strand at 3097.489 kb on + strand at 3097.489 kb on + strand at 3097.685 kb on - strand, within PS417_14120 at 3097.685 kb on - strand, within PS417_14120 at 3097.714 kb on + strand, within PS417_14120 at 3097.796 kb on - strand, within PS417_14120 at 3097.796 kb on - strand, within PS417_14120 at 3097.796 kb on - strand, within PS417_14120 at 3098.047 kb on + strand at 3098.047 kb on + strand, within PS417_14120 at 3098.048 kb on - strand, within PS417_14120 at 3098.048 kb on - strand, within PS417_14120 at 3098.048 kb on - strand, within PS417_14120 at 3098.071 kb on + strand, within PS417_14120 at 3098.072 kb on - strand, within PS417_14120 at 3098.072 kb on - strand, within PS417_14120 at 3098.138 kb on - strand at 3098.188 kb on + strand at 3098.189 kb on - strand at 3098.189 kb on - strand at 3098.205 kb on + strand at 3098.340 kb on - strand, within PS417_14125 at 3098.415 kb on + strand, within PS417_14125
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 3,095,841 - PS417_14110 0.27 -0.1 3,095,994 + -0.4 3,095,994 + PS417_14110 0.42 -0.5 3,096,285 - PS417_14110 0.69 +2.9 3,096,292 + PS417_14110 0.70 +0.3 3,096,561 - -0.5 3,096,561 - -2.9 3,096,612 - -0.4 3,096,643 - -2.6 3,096,643 - -0.3 3,096,643 - +0.0 3,096,664 + -1.4 3,096,664 + +0.1 3,096,667 - +0.2 3,096,674 + -2.7 3,096,675 - +1.6 3,096,919 + PS417_14115 0.25 -1.0 3,096,953 + PS417_14115 0.29 +0.8 3,096,975 + PS417_14115 0.32 +0.6 3,097,026 + +2.7 3,097,026 + PS417_14115 0.39 +1.2 3,097,027 - PS417_14115 0.39 -1.7 3,097,031 - PS417_14115 0.39 +1.0 3,097,073 - PS417_14115 0.45 +0.2 3,097,300 + PS417_14115 0.75 -1.2 3,097,301 - PS417_14115 0.75 +0.1 3,097,302 + PS417_14115 0.75 +2.1 3,097,443 + -1.9 3,097,468 + -0.8 3,097,469 - -1.0 3,097,469 - +2.1 3,097,489 + +2.2 3,097,489 + -3.2 3,097,489 + -1.2 3,097,685 - PS417_14120 0.28 +1.4 3,097,685 - PS417_14120 0.28 +1.8 3,097,714 + PS417_14120 0.33 -2.2 3,097,796 - PS417_14120 0.45 +0.8 3,097,796 - PS417_14120 0.45 +3.6 3,097,796 - PS417_14120 0.45 -0.7 3,098,047 + -0.4 3,098,047 + PS417_14120 0.81 +0.7 3,098,048 - PS417_14120 0.82 +1.1 3,098,048 - PS417_14120 0.82 +2.3 3,098,048 - PS417_14120 0.82 +1.0 3,098,071 + PS417_14120 0.85 +1.9 3,098,072 - PS417_14120 0.85 +2.3 3,098,072 - PS417_14120 0.85 +1.5 3,098,138 - +1.7 3,098,188 + +0.1 3,098,189 - -1.4 3,098,189 - +1.6 3,098,205 + -1.1 3,098,340 - PS417_14125 0.15 +0.5 3,098,415 + PS417_14125 0.22 -0.4
Or see this region's nucleotide sequence