Strain Fitness in Pseudomonas simiae WCS417 around PS417_14010

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,077,175	+		PS417_14005	0.45	-0.4
3,077,229	+		PS417_14005	0.50	+0.3
3,077,334	+		PS417_14005	0.60	+0.6
3,077,335	-		PS417_14005	0.60	-2.7
3,077,352	+		PS417_14005	0.62	-1.0
3,077,388	+		PS417_14005	0.65	-0.8
3,077,389	-		PS417_14005	0.65	+1.1
3,077,389	-		PS417_14005	0.65	-4.0
3,077,389	-		PS417_14005	0.65	-0.0
3,077,560	-				-1.4
3,077,560	-		PS417_14005	0.81	+0.7
3,077,751	+				-0.7
3,077,753	+				-0.2
3,077,786	+				-1.4
3,077,786	+				+1.5
3,077,789	+				+1.2
3,077,798	+				-0.5
3,077,798	+				-0.5
3,077,799	-				-1.0
3,077,799	-				+0.6
3,077,799	-				-0.0
3,077,802	-				-3.0
3,077,897	-				-0.3
3,077,897	-				-0.0
3,078,002	+				-2.6
3,078,009	-				+1.0
3,078,057	-				+1.4
3,078,057	-				+1.4
3,078,166	+		PS417_14010	0.17	-1.3
3,078,166	+		PS417_14010	0.17	-3.9
3,078,206	+		PS417_14010	0.21	-0.6
3,078,206	+		PS417_14010	0.21	-1.1
3,078,206	+		PS417_14010	0.21	-1.3
3,078,416	+		PS417_14010	0.44	+0.4
3,078,416	+		PS417_14010	0.44	+1.7
3,078,416	+		PS417_14010	0.44	-0.3
3,078,416	+		PS417_14010	0.44	-0.8
3,078,416	+		PS417_14010	0.44	-0.0
3,078,417	-		PS417_14010	0.44	-1.0
3,078,451	+		PS417_14010	0.48	+0.6
3,078,451	+		PS417_14010	0.48	-1.7
3,078,451	+		PS417_14010	0.48	+1.8
3,078,452	-		PS417_14010	0.48	+0.6
3,078,724	+		PS417_14010	0.77	-1.3
3,078,724	+		PS417_14010	0.77	-2.2
3,078,725	-		PS417_14010	0.77	-0.4
3,078,725	-		PS417_14010	0.77	-1.1
3,078,725	-		PS417_14010	0.77	+0.2
3,078,904	-				-2.2
3,078,905	+				-1.4
3,078,905	+				-2.2
3,078,905	+				-3.1
3,078,905	+				-0.7
3,078,906	-				-3.4
3,078,906	-				-0.7
3,078,906	-				-0.4
3,078,906	-				+0.4
3,078,906	-				+0.6
3,079,226	-		PS417_14015	0.25	-0.8
3,079,711	+		PS417_14015	0.80	-3.8
3,079,712	-		PS417_14015	0.81	-3.7
3,079,763	-		PS417_14015	0.86	-0.3
3,079,771	+		PS417_14015	0.87	-0.5
3,079,772	-		PS417_14015	0.87	+0.9
3,079,856	+				-0.7
3,079,888	+				-1.1
3,079,888	+				-0.0
3,079,907	+				-3.6
3,079,918	+				+0.2