Strain Fitness in Pseudomonas simiae WCS417 around PS417_13920

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,059,132	+		PS417_13915	0.36	+0.6
3,059,132	+		PS417_13915	0.36	-1.4
3,059,153	+		PS417_13915	0.37	-0.4
3,059,153	+		PS417_13915	0.37	-0.2
3,059,154	-		PS417_13915	0.37	-1.6
3,059,223	-		PS417_13915	0.42	+1.0
3,059,223	-		PS417_13915	0.42	-0.7
3,059,279	-				-1.0
3,059,544	+		PS417_13915	0.65	+0.8
3,059,591	+		PS417_13915	0.68	-0.2
3,059,592	-		PS417_13915	0.68	-2.1
3,059,655	-		PS417_13915	0.73	+0.1
3,059,663	+		PS417_13915	0.73	-0.0
3,059,664	-		PS417_13915	0.74	-3.3
3,059,711	+				-0.4
3,059,712	-		PS417_13915	0.77	-0.1
3,059,712	-		PS417_13915	0.77	-3.2
3,059,775	-		PS417_13915	0.81	-3.0
3,059,775	-		PS417_13915	0.81	+0.2
3,059,951	+				-0.9
3,059,952	-				-0.4
3,059,959	-				+2.3
3,059,969	+				-0.3
3,060,343	+		PS417_13920	0.39	-1.8
3,060,394	-		PS417_13920	0.46	-0.1
3,060,397	-		PS417_13920	0.47	+0.4
3,060,551	+		PS417_13920	0.69	-0.4
3,060,551	+		PS417_13920	0.69	+2.4
3,060,553	+				-1.8
3,060,553	+		PS417_13920	0.70	-1.3
3,060,553	+		PS417_13920	0.70	-1.1
3,060,554	-		PS417_13920	0.70	-0.7
3,060,554	-		PS417_13920	0.70	+0.3
3,060,554	-		PS417_13920	0.70	-1.0
3,060,563	+		PS417_13920	0.71	-0.1
3,060,563	+				-0.4
3,060,573	+		PS417_13920	0.73	-2.4
3,060,574	-		PS417_13920	0.73	-0.8
3,060,646	+		PS417_13920	0.84	-2.4
3,060,647	-		PS417_13920	0.84	-1.2
3,060,647	-		PS417_13920	0.84	-0.1
3,060,748	-				-1.0
3,060,796	+				+0.7
3,060,796	+				-0.9
3,060,796	+				+0.3
3,060,796	+				+0.4
3,060,796	+				+0.6
3,060,797	-				-1.3
3,060,797	-				+0.2
3,060,802	+				-2.6
3,060,803	-				-0.8
3,060,803	-				+0.6
3,060,803	-				-0.3
3,060,806	+				+0.9
3,060,807	-				+0.8
3,060,807	-				-0.7
3,060,807	-				-2.0
3,060,807	-				+1.7
3,061,153	-		PS417_13925	0.62	+0.2
3,061,153	-		PS417_13925	0.62	-2.3
3,061,153	-		PS417_13925	0.62	+1.6
3,061,153	-		PS417_13925	0.62	-0.4
3,061,166	+		PS417_13925	0.65	+0.4
3,061,167	-		PS417_13925	0.65	+0.1
3,061,329	-				-0.1
3,061,403	+				+0.2
3,061,469	+				-2.8
3,061,470	-				-1.1
3,061,533	+				+0.0
3,061,533	+				+0.1
3,061,534	-				-2.0
3,061,534	-				+0.6
3,061,536	-				+0.3
3,061,539	+				+0.9
3,061,539	+				-1.0
3,061,540	-				-0.0
3,061,540	-				-0.3
3,061,740	+		PS417_13930	0.16	-1.4
3,061,740	+		PS417_13930	0.16	-0.7
3,061,740	+		PS417_13930	0.16	-1.8
3,061,740	+				-0.4
3,061,740	+		PS417_13930	0.16	-0.1