Strain Fitness in Pseudomonas simiae WCS417 around PS417_13905

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,053,503	-				+1.9
3,053,503	-				+0.0
3,053,543	+				-2.9
3,053,747	+		PS417_13900	0.25	-0.2
3,053,835	+		PS417_13900	0.36	-3.1
3,053,838	+		PS417_13900	0.37	-1.6
3,053,838	+		PS417_13900	0.37	-0.8
3,053,838	+		PS417_13900	0.37	+0.6
3,053,874	+		PS417_13900	0.41	-0.6
3,053,886	+		PS417_13900	0.42	-0.2
3,054,297	+				-0.6
3,054,373	-				+0.8
3,054,447	+				-0.8
3,054,447	+				+1.2
3,054,448	-				+0.4
3,054,901	-		PS417_13905	0.15	+0.9
3,054,901	-		PS417_13905	0.15	+1.3
3,055,053	+		PS417_13905	0.19	+1.1
3,055,054	-		PS417_13905	0.19	-0.5
3,055,058	-		PS417_13905	0.20	+1.5
3,055,425	+		PS417_13905	0.30	+0.7
3,055,425	+		PS417_13905	0.30	-0.5
3,055,426	-		PS417_13905	0.30	+1.2
3,055,480	-				+1.3
3,055,480	-		PS417_13905	0.32	+2.2
3,055,603	+		PS417_13905	0.35	+0.3
3,055,712	+		PS417_13905	0.38	-0.4
3,055,713	-				-1.0
3,055,779	+		PS417_13905	0.40	-0.0
3,056,213	-		PS417_13905	0.53	-2.6
3,056,260	-		PS417_13905	0.54	+0.5
3,056,398	-		PS417_13905	0.58	-3.8
3,056,729	-		PS417_13905	0.67	-3.0
3,056,729	-		PS417_13905	0.67	+0.3
3,056,962	-		PS417_13905	0.74	-0.4
3,057,003	+		PS417_13905	0.75	+0.3
3,057,004	-		PS417_13905	0.75	-2.7
3,057,004	-		PS417_13905	0.75	+0.5
3,057,041	+				-2.2
3,057,042	-		PS417_13905	0.76	-0.2
3,057,045	+		PS417_13905	0.76	-0.2
3,057,045	+		PS417_13905	0.76	+0.3
3,057,045	+		PS417_13905	0.76	-0.3
3,057,045	+		PS417_13905	0.76	+0.0
3,057,045	+		PS417_13905	0.76	-1.7
3,057,046	-		PS417_13905	0.76	-2.7
3,057,046	-		PS417_13905	0.76	+0.8
3,057,046	-		PS417_13905	0.76	-2.2
3,057,073	-		PS417_13905	0.77	+0.3
3,057,160	+		PS417_13905	0.80	+0.1
3,057,194	+		PS417_13905	0.81	+1.7
3,057,304	-		PS417_13905	0.84	-3.4
3,057,391	-		PS417_13905	0.86	-1.4
3,057,473	-		PS417_13905	0.89	-1.4
3,057,615	+				-0.6
3,057,615	+				-1.2
3,057,757	-				+3.4
3,057,757	-				-3.0
3,057,757	-				-0.2
3,057,757	-				+0.1
3,057,967	-				+1.6
3,058,036	+				-1.2
3,058,037	-				-1.4
3,058,037	-				+2.2
3,058,048	+				-1.0
3,058,083	+				-0.1
3,058,114	+				-3.1
3,058,114	+				+2.3
3,058,114	+				+3.1
3,058,114	+				-1.9
3,058,114	+				-1.0
3,058,114	+				-2.0
3,058,115	-				-0.5
3,058,115	-				+0.8
3,058,115	-				-0.4
3,058,266	+				-1.0
3,058,470	-				+0.7
3,058,534	+				+0.8
3,058,558	+				+1.1
3,058,599	-				+1.4
3,058,599	-				-0.1
3,058,627	+				-1.0
3,058,628	-				+0.1
3,058,628	-				-0.4
3,058,751	+				+2.3
3,058,751	+				+2.9
3,058,751	+				-2.0
3,058,755	+				+0.8
3,058,755	+				+2.0
3,058,755	+				+0.4
3,058,755	+				-0.4
3,058,755	+				-0.0
3,058,755	+				+1.8
3,058,756	-				+0.8
3,058,756	-				-0.3
3,058,756	-				-0.7
3,058,756	-				+1.0
3,058,757	+				-0.4
3,058,758	-				+2.1
3,058,793	+		PS417_13915	0.11	-1.8