Strain Fitness in Pseudomonas simiae WCS417 around PS417_13830

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,037,497	+		PS417_13825	0.50	+0.2
3,037,498	-		PS417_13825	0.50	+1.3
3,037,498	-		PS417_13825	0.50	+0.3
3,037,660	+		PS417_13825	0.60	-0.4
3,037,660	+		PS417_13825	0.60	+2.1
3,037,660	+		PS417_13825	0.60	+1.0
3,037,956	+		PS417_13825	0.78	+0.2
3,037,956	+		PS417_13825	0.78	+0.5
3,037,957	-		PS417_13825	0.78	+0.9
3,037,957	-		PS417_13825	0.78	+1.3
3,037,958	+		PS417_13825	0.78	-2.6
3,037,959	-		PS417_13825	0.78	+0.8
3,037,959	-		PS417_13825	0.78	-0.0
3,037,992	+		PS417_13825	0.80	-0.8
3,037,993	-		PS417_13825	0.80	+0.8
3,038,094	+		PS417_13825	0.87	-2.6
3,038,122	+		PS417_13825	0.88	+0.5
3,038,200	-				+0.3
3,038,271	+				+0.3
3,038,271	+				+2.1
3,038,272	-				+0.9
3,038,275	+				+0.2
3,038,275	+				+0.8
3,038,276	-				+3.1
3,038,276	-				+2.0
3,038,359	+				+0.7
3,038,360	-				-2.5
3,038,718	+		PS417_13830	0.32	+0.6
3,038,719	-		PS417_13830	0.32	-3.0
3,038,961	+		PS417_13830	0.66	+1.3
3,039,109	+		PS417_13830	0.87	+0.2
3,039,110	-		PS417_13830	0.87	+0.7
3,039,110	-		PS417_13830	0.87	+1.2
3,039,181	+				+0.6
3,039,225	+				-0.2
3,039,225	+				-1.6
3,039,226	-				-2.2
3,039,260	-				+0.3
3,039,326	+				+1.1
3,039,327	-				+1.3
3,039,538	+				-1.4
3,039,539	-		PS417_13835	0.18	+1.1
3,039,808	-		PS417_13835	0.42	+0.3
3,039,831	+		PS417_13835	0.44	-0.8
3,039,832	-		PS417_13835	0.44	-1.0
3,039,867	+		PS417_13835	0.47	+0.1
3,039,867	+		PS417_13835	0.47	+1.1
3,039,867	+		PS417_13835	0.47	-3.2
3,039,868	-		PS417_13835	0.47	+1.0
3,039,868	-		PS417_13835	0.47	-1.1
3,039,933	+		PS417_13835	0.53	+1.8
3,039,933	+		PS417_13835	0.53	+1.0