Strain Fitness in Pseudomonas simiae WCS417 around PS417_13770

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
3,023,606	+		PS417_13765	0.64	+0.3
3,023,607	-		PS417_13765	0.64	+0.1
3,023,607	-				+0.6
3,023,608	+		PS417_13765	0.64	-1.4
3,023,609	-		PS417_13765	0.64	+0.6
3,023,609	-		PS417_13765	0.64	-0.7
3,023,825	+		PS417_13765	0.77	+0.6
3,023,825	+		PS417_13765	0.77	+0.1
3,023,825	+		PS417_13765	0.77	+0.7
3,023,825	+		PS417_13765	0.77	+0.2
3,023,825	+		PS417_13765	0.77	-1.0
3,023,825	+		PS417_13765	0.77	+1.3
3,023,825	+		PS417_13765	0.77	-0.6
3,023,825	+		PS417_13765	0.77	-1.4
3,023,825	+		PS417_13765	0.77	+2.3
3,023,825	+		PS417_13765	0.77	-3.8
3,023,826	-		PS417_13765	0.77	+1.6
3,023,826	-		PS417_13765	0.77	-1.8
3,023,826	-		PS417_13765	0.77	-0.4
3,023,826	-		PS417_13765	0.77	-1.0
3,023,826	-		PS417_13765	0.77	-1.6
3,023,826	-		PS417_13765	0.77	-1.6
3,023,827	+		PS417_13765	0.77	+0.0
3,023,827	+		PS417_13765	0.77	-0.5
3,023,828	-		PS417_13765	0.77	+0.7
3,023,828	-		PS417_13765	0.77	-0.2
3,023,828	-		PS417_13765	0.77	+0.4
3,023,828	-		PS417_13765	0.77	-1.4
3,023,829	+		PS417_13765	0.77	-2.9
3,023,829	+		PS417_13765	0.77	-1.1
3,023,829	+		PS417_13765	0.77	+2.3
3,023,829	+		PS417_13765	0.77	+0.4
3,023,829	+		PS417_13765	0.77	-0.1
3,023,830	-		PS417_13765	0.77	-0.0
3,023,830	-		PS417_13765	0.77	+0.0
3,023,830	-		PS417_13765	0.77	-0.1
3,023,830	-		PS417_13765	0.77	+0.1
3,023,830	-		PS417_13765	0.77	+2.2
3,023,830	-		PS417_13765	0.77	-0.7
3,024,046	+				-0.1
3,024,047	-				-0.3
3,024,118	-				+1.4
3,024,200	-				+1.6
3,024,200	-				-0.6
3,024,200	-				+0.5
3,024,200	-				+0.6
3,024,202	-				-1.0
3,024,202	-				-2.1
3,024,202	-				-0.8
3,024,274	-				+0.6
3,024,274	-				-1.7
3,024,281	-				-1.7
3,024,281	-				+1.3
3,024,291	-				+0.2
3,024,429	+				+0.1
3,024,430	-				-0.4
3,024,724	-		PS417_13770	0.31	+1.4
3,024,961	-		PS417_13770	0.50	+0.4
3,024,961	-		PS417_13770	0.50	-1.9
3,025,062	+		PS417_13770	0.59	+0.0
3,025,062	+		PS417_13770	0.59	-0.3
3,025,062	+		PS417_13770	0.59	-0.1
3,025,071	+		PS417_13770	0.59	-0.4
3,025,465	+				-3.4
3,025,612	+				-4.0
3,025,638	+				-1.7
3,025,639	-				+0.4
3,025,645	+				+0.5
3,025,645	+				-0.2
3,025,645	+				-0.3
3,025,646	-				+0.2
3,025,646	-				+0.3
3,025,652	-				-0.2
3,025,701	-				+0.9
3,025,701	-				+0.4
3,025,701	-				-0.7
3,025,718	+				+1.1
3,025,719	-				+0.9
3,025,719	-				-1.7
3,025,722	-				+0.4
3,025,729	+				+1.1
3,025,747	-				+1.5
3,025,747	-				+3.3
3,025,747	-				-0.1
3,025,858	+		PS417_13775	0.12	-1.7
3,025,975	+		PS417_13775	0.25	+0.1
3,025,975	+		PS417_13775	0.25	-1.0
3,026,256	+		PS417_13775	0.58	-0.4
3,026,283	+		PS417_13775	0.61	+0.9
3,026,284	-		PS417_13775	0.61	+0.3
3,026,284	-		PS417_13775	0.61	+0.0
3,026,284	-		PS417_13775	0.61	-3.0
3,026,536	+				-0.9
3,026,536	+				+0.6
3,026,536	+				-0.1
3,026,537	-				-0.2
3,026,537	-				+0.3
3,026,537	-				+0.8