Strain Fitness in Pseudomonas simiae WCS417 around PS417_13650
Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.032 vol% |
---|---|---|---|---|---|
remove | |||||
3,003,034 | - | PS417_13645 | 0.21 | +0.7 | |
3,003,065 | + | PS417_13645 | 0.25 | -0.4 | |
3,003,249 | + | PS417_13645 | 0.44 | +2.5 | |
3,003,598 | + | PS417_13645 | 0.82 | -1.6 | |
3,003,738 | - | +0.5 | |||
3,003,742 | - | -3.1 | |||
3,003,742 | - | -2.2 | |||
3,003,742 | - | -0.4 | |||
3,003,742 | - | -0.6 | |||
3,003,759 | - | -3.2 | |||
3,003,923 | - | PS417_13650 | 0.13 | -2.7 | |
3,003,923 | - | PS417_13650 | 0.13 | -0.1 | |
3,003,969 | + | PS417_13650 | 0.18 | -0.7 | |
3,004,007 | - | PS417_13650 | 0.22 | -1.7 | |
3,004,761 | + | -0.0 | |||
3,004,762 | - | +0.5 | |||
3,004,918 | + | +0.6 | |||
3,005,081 | + | PS417_13655 | 0.19 | -3.7 | |
3,005,651 | + | PS417_13655 | 0.57 | -0.9 |
Or see this region's nucleotide sequence