Strain Fitness in Pseudomonas simiae WCS417 around PS417_13620
Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.032 vol% |
---|---|---|---|---|---|
remove | |||||
2,998,332 | + | PS417_13615 | 0.72 | -3.3 | |
2,998,649 | + | -0.4 | |||
2,998,863 | + | PS417_13620 | 0.18 | -1.3 | |
2,998,864 | - | PS417_13620 | 0.19 | -0.6 | |
2,999,357 | - | +1.5 | |||
2,999,622 | + | -0.1 | |||
2,999,622 | + | +0.2 | |||
2,999,623 | - | +2.0 | |||
2,999,679 | + | PS417_13625 | 0.15 | +0.7 | |
2,999,680 | - | PS417_13625 | 0.16 | -0.6 | |
2,999,867 | + | PS417_13625 | 0.50 | +0.3 | |
2,999,868 | - | PS417_13625 | 0.50 | +0.7 | |
2,999,883 | + | PS417_13625 | 0.53 | +0.4 | |
2,999,884 | - | PS417_13625 | 0.53 | +1.9 | |
3,000,217 | + | -0.9 | |||
3,000,218 | - | -0.1 |
Or see this region's nucleotide sequence