Strain Fitness in Pseudomonas simiae WCS417 around PS417_13505

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
2,976,399	+		PS417_13500	0.60	+1.1
2,976,400	-		PS417_13500	0.60	-1.5
2,976,400	-		PS417_13500	0.60	+0.7
2,976,651	+		PS417_13500	0.71	-1.0
2,976,655	-		PS417_13500	0.71	-2.0
2,976,727	+		PS417_13500	0.74	-3.1
2,976,727	+		PS417_13500	0.74	+0.6
2,976,727	+		PS417_13500	0.74	+1.3
2,976,728	-		PS417_13500	0.74	-0.1
2,976,816	+		PS417_13500	0.78	-2.6
2,976,838	-		PS417_13500	0.79	+1.3
2,976,838	-		PS417_13500	0.79	-1.4
2,976,838	-		PS417_13500	0.79	-2.2
2,976,886	+		PS417_13500	0.81	+1.3
2,977,094	-				+1.7
2,977,155	+				+1.1
2,977,155	+				-0.5
2,977,156	-				+0.9
2,977,161	+				+2.1
2,977,161	+				+0.8
2,977,162	-				+0.3
2,977,162	-				+0.6
2,977,428	+				-3.2
2,977,438	+				+0.1
2,977,624	-		PS417_13505	0.25	+1.6
2,977,835	+		PS417_13505	0.48	-2.7
2,977,835	+		PS417_13505	0.48	-1.4
2,977,835	+		PS417_13505	0.48	+0.5
2,977,836	-		PS417_13505	0.48	+0.6
2,977,836	-		PS417_13505	0.48	+0.1
2,977,836	-		PS417_13505	0.48	+1.6
2,978,027	+		PS417_13505	0.68	+1.0
2,978,130	+		PS417_13505	0.79	+0.5
2,978,238	+				+0.5
2,978,238	+				+0.6
2,978,700	-		PS417_13510	0.59	+1.0
2,978,893	+				-1.5
2,978,894	-				+1.1
2,978,923	+				+0.5
2,978,923	+				-0.4
2,978,924	-				-0.3
2,978,924	-				-1.4
2,978,924	-				+0.6
2,978,924	-				+2.8
2,978,924	-				+0.5
2,978,924	-				+2.0
2,978,966	+				-0.6
2,978,966	+				-0.3
2,978,967	-				+0.1
2,979,100	-		PS417_13515	0.12	+1.1
2,979,100	-		PS417_13515	0.12	-0.4
2,979,286	-		PS417_13515	0.32	-0.0