Strain Fitness in Pseudomonas simiae WCS417 around PS417_12480

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
2,713,475	+				-2.7
2,713,475	+				+1.4
2,713,475	+				+0.8
2,713,500	+				+0.3
2,713,501	-				-2.7
2,713,501	-				+1.2
2,713,501	-				+0.6
2,713,523	-				-1.7
2,713,547	+				+3.8
2,713,589	+				+0.6
2,713,590	-				-1.4
2,713,743	-		PS417_12475	0.20	+0.5
2,713,778	+		PS417_12475	0.25	+0.6
2,713,938	+		PS417_12475	0.46	+0.6
2,713,938	+		PS417_12475	0.46	+1.4
2,713,938	+		PS417_12475	0.46	+1.8
2,713,939	-		PS417_12475	0.47	+0.6
2,713,939	-				+1.5
2,713,939	-		PS417_12475	0.47	-0.1
2,713,948	+		PS417_12475	0.48	-0.2
2,713,955	+		PS417_12475	0.49	-0.2
2,713,955	+		PS417_12475	0.49	-0.5
2,713,973	+		PS417_12475	0.51	-3.9
2,713,973	+		PS417_12475	0.51	-1.3
2,714,082	+		PS417_12475	0.66	+0.7
2,714,082	+		PS417_12475	0.66	-0.9
2,714,083	-		PS417_12475	0.66	+1.2
2,714,086	+		PS417_12475	0.66	-3.4
2,714,087	-		PS417_12475	0.66	+1.6
2,714,144	+		PS417_12475	0.74	+0.1
2,714,145	-		PS417_12475	0.74	-0.5
2,714,196	-		PS417_12475	0.81	+0.3
2,714,216	-		PS417_12475	0.84	-1.7
2,714,282	-				-1.7
2,714,282	-				+2.5
2,714,364	+				-0.4
2,714,600	+		PS417_12480	0.33	-2.8
2,714,600	+				-1.7
2,714,601	-		PS417_12480	0.33	-2.2
2,714,626	+		PS417_12480	0.37	+0.1
2,714,645	+		PS417_12480	0.39	-0.2
2,714,714	+		PS417_12480	0.49	-0.3
2,714,781	+		PS417_12480	0.59	-0.2
2,714,785	+		PS417_12480	0.60	-0.3
2,714,785	+		PS417_12480	0.60	+0.7
2,714,852	+		PS417_12480	0.70	-2.3
2,714,944	-		PS417_12480	0.83	-0.1
2,715,086	-				-2.3
2,715,209	+				-1.7
2,715,267	-		PS417_12485	0.20	+1.4
2,715,270	+		PS417_12485	0.20	-0.9
2,715,271	-		PS417_12485	0.21	-0.0
2,715,318	+		PS417_12485	0.27	+0.5
2,715,561	+		PS417_12485	0.60	+0.1
2,715,561	+		PS417_12485	0.60	+1.1
2,715,652	+				-0.9
2,715,725	+		PS417_12485	0.82	+0.2
2,715,726	-				-0.3
2,715,875	+				-0.0
2,715,887	+				-1.9
2,715,887	+				-3.3
2,715,915	-				-2.3
2,715,926	-				+2.2