Strain Fitness in Pseudomonas simiae WCS417 around PS417_12210

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
2,652,509	+		PS417_12205	0.53	-2.1
2,652,603	-		PS417_12205	0.59	-0.8
2,652,629	+		PS417_12205	0.60	-0.1
2,652,629	+		PS417_12205	0.60	-0.4
2,652,665	+		PS417_12205	0.62	-3.1
2,652,722	+		PS417_12205	0.65	+1.2
2,652,723	-		PS417_12205	0.65	-0.3
2,653,157	+		PS417_12205	0.89	-0.0
2,653,158	-		PS417_12205	0.89	+0.5
2,653,355	+				+0.7
2,653,355	+				+1.3
2,653,356	-				-2.3
2,653,356	-				+0.3
2,653,410	-				+1.4
2,653,463	-				+0.1
2,653,610	-		PS417_12210	0.14	-0.1
2,653,652	-		PS417_12210	0.16	-1.3
2,653,652	-		PS417_12210	0.16	+0.8
2,653,738	+		PS417_12210	0.21	-1.3
2,653,843	-				-2.1
2,653,992	-		PS417_12210	0.35	-0.7
2,654,090	-		PS417_12210	0.40	-1.3
2,654,108	-		PS417_12210	0.41	-1.5
2,654,329	+		PS417_12210	0.53	-2.2
2,654,330	-		PS417_12210	0.53	+1.8
2,654,330	-		PS417_12210	0.53	+1.0
2,654,330	-		PS417_12210	0.53	-0.0
2,654,330	-		PS417_12210	0.53	+0.7
2,654,330	-		PS417_12210	0.53	-2.8
2,654,407	+		PS417_12210	0.57	+0.2
2,654,408	-		PS417_12210	0.57	-0.5
2,654,408	-		PS417_12210	0.57	+1.1
2,654,408	-		PS417_12210	0.57	+1.4
2,654,408	-		PS417_12210	0.57	-0.2
2,654,414	-		PS417_12210	0.58	-0.7
2,654,936	-		PS417_12210	0.86	+0.6
2,655,108	-				-0.3
2,655,108	-				-0.3
2,655,162	+				-3.3
2,655,162	+				+0.6
2,655,163	-				+0.2
2,655,163	-				-0.3
2,655,163	-				+0.6
2,655,165	+				+0.3
2,655,165	+				-0.9
2,655,169	-				-2.5
2,655,169	-				-3.6
2,655,401	+				-1.4
2,655,401	+				-0.1
2,655,402	-				-3.0
2,655,513	-				-1.7
2,655,539	+				-1.4
2,655,540	-				-3.0
2,655,540	-				+0.6
2,655,716	+		PS417_12215	0.22	-0.0
2,655,716	+		PS417_12215	0.22	-0.0
2,655,717	-		PS417_12215	0.22	-0.0
2,655,726	+		PS417_12215	0.23	-2.3
2,656,028	+		PS417_12215	0.44	+0.2
2,656,080	-		PS417_12215	0.48	+0.6
2,656,185	-		PS417_12215	0.55	-2.3