Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12020 and PS417_12025 are separated by 120 nucleotides PS417_12025 and PS417_12030 are separated by 150 nucleotides
PS417_12020: PS417_12020 - peptidase, at 2,610,826 to 2,611,851
_12020
PS417_12025: PS417_12025 - DSBA oxidoreductase, at 2,611,972 to 2,613,507
_12025
PS417_12030: PS417_12030 - LysR family transcriptional regulator, at 2,613,658 to 2,614,554
_12030
Position (kb)
2611
2612
2613
2614 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2610.979 kb on + strand, within PS417_12020 at 2610.979 kb on + strand, within PS417_12020 at 2610.980 kb on - strand, within PS417_12020 at 2611.484 kb on - strand, within PS417_12020 at 2611.697 kb on - strand, within PS417_12020 at 2611.741 kb on + strand, within PS417_12020 at 2611.742 kb on - strand, within PS417_12020 at 2612.450 kb on + strand, within PS417_12025 at 2612.451 kb on - strand, within PS417_12025 at 2612.788 kb on + strand, within PS417_12025 at 2612.789 kb on - strand, within PS417_12025 at 2612.797 kb on + strand, within PS417_12025 at 2612.798 kb on - strand, within PS417_12025 at 2613.033 kb on - strand, within PS417_12025 at 2613.353 kb on + strand, within PS417_12025 at 2613.353 kb on + strand at 2613.354 kb on - strand at 2613.478 kb on + strand at 2613.569 kb on - strand at 2613.569 kb on - strand at 2613.693 kb on - strand at 2614.094 kb on - strand, within PS417_12030 at 2614.094 kb on - strand, within PS417_12030 at 2614.094 kb on - strand, within PS417_12030 at 2614.161 kb on - strand, within PS417_12030
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 2,610,979 + PS417_12020 0.15 +0.1 2,610,979 + PS417_12020 0.15 +0.4 2,610,980 - PS417_12020 0.15 +0.5 2,611,484 - PS417_12020 0.64 +2.0 2,611,697 - PS417_12020 0.85 +0.2 2,611,741 + PS417_12020 0.89 -0.1 2,611,742 - PS417_12020 0.89 +0.2 2,612,450 + PS417_12025 0.31 -0.8 2,612,451 - PS417_12025 0.31 -1.8 2,612,788 + PS417_12025 0.53 -1.1 2,612,789 - PS417_12025 0.53 +1.2 2,612,797 + PS417_12025 0.54 +0.9 2,612,798 - PS417_12025 0.54 +2.5 2,613,033 - PS417_12025 0.69 +0.7 2,613,353 + PS417_12025 0.90 +0.7 2,613,353 + -0.3 2,613,354 - +0.5 2,613,478 + -0.9 2,613,569 - +2.8 2,613,569 - +1.8 2,613,693 - +2.4 2,614,094 - PS417_12030 0.49 -3.2 2,614,094 - PS417_12030 0.49 -1.6 2,614,094 - PS417_12030 0.49 -0.6 2,614,161 - PS417_12030 0.56 +0.5
Or see this region's nucleotide sequence