Strain Fitness in Pseudomonas simiae WCS417 around PS417_11305
Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.032 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,420,230 | - | PS417_11300 | 0.54 | +0.1 | |
| 2,420,894 | + | -3.1 | |||
| 2,421,269 | + | PS417_11305 | 0.32 | -1.8 | |
| 2,421,339 | - | PS417_11305 | 0.38 | +0.2 | |
| 2,421,443 | + | PS417_11305 | 0.47 | +3.2 | |
| 2,421,444 | - | PS417_11305 | 0.47 | -2.2 | |
| 2,421,444 | - | PS417_11305 | 0.47 | -3.2 | |
| 2,421,444 | - | PS417_11305 | 0.47 | +2.2 | |
| 2,421,597 | - | PS417_11305 | 0.59 | +1.2 | |
| 2,422,072 | - | +0.3 | |||
| 2,422,089 | - | +0.8 | |||
| 2,422,118 | + | -0.8 | |||
| 2,422,119 | - | -0.1 | |||
| 2,422,305 | + | -3.2 | |||
| 2,422,393 | + | +0.8 | |||
| 2,422,547 | + | PS417_11310 | 0.11 | +0.7 | |
| 2,422,548 | - | PS417_11310 | 0.11 | -3.9 | |
| 2,422,621 | + | PS417_11310 | 0.17 | -1.8 | |
| 2,422,708 | + | PS417_11310 | 0.24 | +2.3 | |
| 2,422,709 | - | PS417_11310 | 0.24 | -0.7 |
Or see this region's nucleotide sequence