Strain Fitness in Pseudomonas simiae WCS417 around PS417_11190

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
2,398,908	+				+0.8
2,398,933	-				-1.2
2,398,936	-				+0.1
2,398,941	+				+0.1
2,398,942	-				-2.5
2,399,016	-		PS417_11185	0.13	-0.7
2,399,219	+		PS417_11185	0.43	-2.8
2,399,439	+		PS417_11185	0.76	-2.5
2,399,440	-		PS417_11185	0.76	+1.5
2,399,605	+				+1.9
2,399,605	+				-0.7
2,399,606	-				-2.4
2,399,637	+				+1.0
2,399,726	+				+1.6
2,399,741	+				+1.1
2,399,741	+				+1.2
2,399,814	+		PS417_11190	0.12	+0.8
2,399,887	-		PS417_11190	0.18	-3.8
2,399,908	-		PS417_11190	0.20	-1.7
2,400,427	-		PS417_11190	0.66	-1.2
2,400,463	-		PS417_11190	0.69	+0.9
2,400,504	+		PS417_11190	0.73	-0.8
2,400,505	-		PS417_11190	0.73	+2.7
2,400,754	+				-0.6
2,400,755	-				+0.3
2,400,755	-				-0.2
2,400,777	+				+0.0
2,400,795	+				-0.9
2,400,957	+				+3.7
2,401,017	+		PS417_11195	0.14	+0.2
2,401,018	-		PS417_11195	0.14	-0.5
2,401,481	+		PS417_11195	0.60	+0.1