Strain Fitness in Pseudomonas simiae WCS417 around PS417_10240

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
2,188,258	+				-1.1
2,188,300	-				-2.8
2,188,300	-				+0.1
2,188,364	+				+0.8
2,188,364	+				+1.0
2,188,519	-		PS417_10235	0.33	+1.6
2,188,519	-		PS417_10235	0.33	-1.1
2,188,522	+		PS417_10235	0.34	-1.5
2,188,522	+		PS417_10235	0.34	+0.5
2,188,522	+		PS417_10235	0.34	-0.5
2,188,522	+		PS417_10235	0.34	+0.6
2,188,559	+		PS417_10235	0.42	+0.2
2,188,591	+		PS417_10235	0.48	+2.6
2,188,592	-		PS417_10235	0.49	+0.2
2,188,592	-		PS417_10235	0.49	-1.5
2,188,592	-		PS417_10235	0.49	+0.5
2,188,664	+		PS417_10235	0.64	-2.8
2,188,664	+		PS417_10235	0.64	+0.7
2,188,692	+		PS417_10235	0.69	-0.7
2,188,693	-		PS417_10235	0.70	+1.3
2,188,693	-		PS417_10235	0.70	+0.2
2,188,877	-				+2.3
2,188,934	+				+0.4
2,188,935	-				+1.2
2,188,978	+				-1.5
2,188,978	+				+0.9
2,188,978	+				+0.6
2,189,011	+				-0.5
2,189,011	+				+0.6
2,189,069	+				-2.6
2,189,069	+				-1.6
2,189,070	-				+0.4
2,189,070	-				-1.5
2,189,070	-				+0.5
2,189,070	-				-2.1
2,189,080	+				+0.6
2,189,385	+		PS417_10240	0.45	+0.1
2,189,386	-		PS417_10240	0.45	+0.4
2,189,387	+		PS417_10240	0.45	+1.8
2,189,659	+				+0.9
2,189,660	-		PS417_10240	0.85	+2.1
2,189,660	-		PS417_10240	0.85	+0.9
2,189,660	-		PS417_10240	0.85	-1.7
2,189,789	+				-1.1
2,189,789	+				+0.6
2,189,789	+				+0.8
2,189,790	-				+1.8
2,189,790	-				-1.1
2,189,796	-				-1.1
2,189,796	-				-1.5
2,189,833	+		PS417_10245	0.11	-0.1
2,190,099	-		PS417_10245	0.84	-0.1
2,190,115	-		PS417_10245	0.88	-2.1
2,190,163	+				-0.7
2,190,181	-				-3.2
2,190,376	+				+0.1
2,190,441	+				+0.9
2,190,442	-				+2.9
2,190,445	+				-1.1
2,190,446	-				+1.9
2,190,458	+				+1.3
2,190,459	-				-2.0
2,190,461	-				-1.0
2,190,461	-				+1.6
2,190,461	-				+0.6
2,190,461	-				+1.4
2,190,461	-				+0.6
2,190,461	-				+0.9
2,190,462	+				+1.0
2,190,462	+				-0.1
2,190,462	+				+0.2
2,190,462	+				+2.9
2,190,462	+				+0.9
2,190,462	+				-0.8
2,190,463	-				+1.4
2,190,480	-				-1.7
2,190,480	-				-0.1
2,190,620	-		PS417_10250	0.21	-0.0