Strain Fitness in Pseudomonas simiae WCS417 around PS417_10070

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
2,159,616	+				+1.2
2,159,617	-				+1.0
2,159,617	-				+0.6
2,159,634	+				+1.2
2,159,742	+				-0.1
2,159,743	-				+0.5
2,159,743	-				-1.0
2,159,814	+				-0.8
2,159,815	-				-3.0
2,159,815	-				+1.4
2,159,828	-				-3.1
2,159,859	+				+0.1
2,159,859	+				-1.9
2,159,859	+				-2.7
2,159,859	+				+0.1
2,159,859	+				+0.2
2,159,876	+				+0.7
2,159,923	-				+1.1
2,160,084	+				+0.9
2,160,084	+		PS417_10065	0.21	-2.1
2,160,110	+		PS417_10065	0.25	+0.4
2,160,350	-		PS417_10065	0.63	-0.1
2,160,350	-		PS417_10065	0.63	+0.7
2,160,376	+				+0.9
2,160,376	+		PS417_10065	0.67	+0.5
2,160,377	-		PS417_10065	0.67	-0.5
2,160,377	-		PS417_10065	0.67	-0.4
2,160,377	-		PS417_10065	0.67	+1.1
2,160,593	-				-1.1
2,160,642	+				-0.7
2,160,912	+		PS417_10070	0.65	+1.1
2,160,913	-		PS417_10070	0.66	+0.4
2,160,967	+		PS417_10070	0.77	-0.1
2,160,967	+		PS417_10070	0.77	+0.5
2,160,967	+		PS417_10070	0.77	+1.0
2,160,967	+		PS417_10070	0.77	+0.2
2,160,968	-		PS417_10070	0.77	+0.2
2,160,968	-		PS417_10070	0.77	+1.2
2,161,070	-				-0.9
2,161,198	+		PS417_10075	0.11	+0.5
2,161,208	+		PS417_10075	0.12	+2.1
2,161,208	+		PS417_10075	0.12	-1.7
2,161,223	+		PS417_10075	0.13	-2.1
2,161,326	-		PS417_10075	0.21	+0.5
2,161,326	-		PS417_10075	0.21	-0.3
2,161,526	-		PS417_10075	0.36	-0.0
2,161,604	+		PS417_10075	0.42	-0.0
2,161,604	+		PS417_10075	0.42	+0.6
2,161,604	+		PS417_10075	0.42	+0.2
2,161,658	+		PS417_10075	0.46	-0.9
2,161,658	+		PS417_10075	0.46	+0.5
2,161,706	+		PS417_10075	0.50	-0.3
2,161,706	+		PS417_10075	0.50	-0.3
2,161,748	+		PS417_10075	0.53	+0.2
2,161,749	-		PS417_10075	0.53	+0.1
2,161,749	-		PS417_10075	0.53	+1.4
2,161,757	+		PS417_10075	0.54	+1.0