Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09755 and PS417_09765 are separated by 651 nucleotides PS417_09765 and PS417_09770 are separated by 58 nucleotides
PS417_09755: PS417_09755 - hypothetical protein, at 2,114,783 to 2,115,316
_09755
PS417_09765: PS417_09765 - hypothetical protein, at 2,115,968 to 2,116,879
_09765
PS417_09770: PS417_09770 - MFS transporter, at 2,116,938 to 2,118,089
_09770
Position (kb)
2115
2116
2117 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2115.130 kb on + strand, within PS417_09755 at 2115.182 kb on + strand, within PS417_09755 at 2115.251 kb on - strand, within PS417_09755 at 2115.251 kb on - strand, within PS417_09755 at 2115.253 kb on + strand, within PS417_09755 at 2115.254 kb on - strand, within PS417_09755 at 2115.258 kb on - strand at 2115.258 kb on - strand, within PS417_09755 at 2115.370 kb on + strand at 2115.411 kb on + strand at 2115.411 kb on + strand at 2115.426 kb on - strand at 2115.472 kb on - strand at 2115.519 kb on + strand at 2115.519 kb on + strand at 2115.802 kb on + strand at 2115.946 kb on + strand at 2115.946 kb on + strand at 2115.995 kb on + strand at 2115.995 kb on + strand at 2115.998 kb on - strand at 2116.053 kb on - strand at 2116.359 kb on + strand, within PS417_09765 at 2116.592 kb on + strand, within PS417_09765 at 2116.713 kb on + strand, within PS417_09765 at 2116.713 kb on + strand, within PS417_09765 at 2116.713 kb on + strand at 2116.714 kb on - strand, within PS417_09765 at 2116.714 kb on - strand, within PS417_09765 at 2116.715 kb on + strand, within PS417_09765 at 2116.715 kb on + strand, within PS417_09765 at 2116.715 kb on + strand, within PS417_09765 at 2116.715 kb on + strand, within PS417_09765 at 2116.716 kb on - strand, within PS417_09765 at 2116.716 kb on - strand at 2116.716 kb on - strand, within PS417_09765 at 2116.716 kb on - strand, within PS417_09765 at 2116.769 kb on + strand, within PS417_09765 at 2116.770 kb on - strand, within PS417_09765 at 2116.770 kb on - strand, within PS417_09765 at 2116.770 kb on - strand, within PS417_09765 at 2116.771 kb on + strand, within PS417_09765 at 2116.772 kb on - strand, within PS417_09765 at 2116.785 kb on - strand, within PS417_09765 at 2116.877 kb on + strand at 2116.878 kb on - strand at 2116.883 kb on - strand at 2117.135 kb on + strand, within PS417_09770 at 2117.137 kb on + strand, within PS417_09770 at 2117.138 kb on - strand, within PS417_09770 at 2117.138 kb on - strand at 2117.172 kb on + strand, within PS417_09770 at 2117.231 kb on + strand, within PS417_09770 at 2117.231 kb on + strand, within PS417_09770 at 2117.360 kb on - strand, within PS417_09770 at 2117.360 kb on - strand, within PS417_09770 at 2117.360 kb on - strand, within PS417_09770 at 2117.723 kb on + strand, within PS417_09770
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 2,115,130 + PS417_09755 0.65 -0.4 2,115,182 + PS417_09755 0.75 -2.5 2,115,251 - PS417_09755 0.88 -1.1 2,115,251 - PS417_09755 0.88 +0.2 2,115,253 + PS417_09755 0.88 -0.0 2,115,254 - PS417_09755 0.88 -0.4 2,115,258 - +0.9 2,115,258 - PS417_09755 0.89 -2.0 2,115,370 + -1.9 2,115,411 + -1.2 2,115,411 + -1.3 2,115,426 - -2.1 2,115,472 - -0.2 2,115,519 + +0.3 2,115,519 + +2.2 2,115,802 + +0.1 2,115,946 + -3.0 2,115,946 + -0.2 2,115,995 + +2.2 2,115,995 + -0.9 2,115,998 - -0.1 2,116,053 - -2.4 2,116,359 + PS417_09765 0.43 -1.9 2,116,592 + PS417_09765 0.68 -0.3 2,116,713 + PS417_09765 0.82 -2.7 2,116,713 + PS417_09765 0.82 -2.9 2,116,713 + -1.1 2,116,714 - PS417_09765 0.82 +0.9 2,116,714 - PS417_09765 0.82 -1.9 2,116,715 + PS417_09765 0.82 -0.3 2,116,715 + PS417_09765 0.82 -0.2 2,116,715 + PS417_09765 0.82 -0.0 2,116,715 + PS417_09765 0.82 -1.2 2,116,716 - PS417_09765 0.82 +2.0 2,116,716 - -1.9 2,116,716 - PS417_09765 0.82 -1.6 2,116,716 - PS417_09765 0.82 +0.1 2,116,769 + PS417_09765 0.88 -2.3 2,116,770 - PS417_09765 0.88 -0.5 2,116,770 - PS417_09765 0.88 -2.3 2,116,770 - PS417_09765 0.88 -0.4 2,116,771 + PS417_09765 0.88 -2.4 2,116,772 - PS417_09765 0.88 -2.4 2,116,785 - PS417_09765 0.90 -4.1 2,116,877 + +1.0 2,116,878 - -4.4 2,116,883 - +1.0 2,117,135 + PS417_09770 0.17 +0.2 2,117,137 + PS417_09770 0.17 +1.6 2,117,138 - PS417_09770 0.17 -0.0 2,117,138 - -0.7 2,117,172 + PS417_09770 0.20 -0.5 2,117,231 + PS417_09770 0.25 -0.0 2,117,231 + PS417_09770 0.25 -0.9 2,117,360 - PS417_09770 0.37 -0.5 2,117,360 - PS417_09770 0.37 -2.7 2,117,360 - PS417_09770 0.37 -1.3 2,117,723 + PS417_09770 0.68 -0.5
Or see this region's nucleotide sequence