Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00900 and PS417_00905 are separated by 139 nucleotides PS417_00905 and PS417_00910 are separated by 2 nucleotides
PS417_00900: PS417_00900 - 4-aminobutyrate aminotransferase, at 200,854 to 202,131
_00900
PS417_00905: PS417_00905 - histidine kinase, at 202,271 to 203,479
_00905
PS417_00910: PS417_00910 - diguanylate cyclase, at 203,482 to 204,483
_00910
Position (kb) 202
203
204 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 201.710 kb on - strand, within PS417_00900 at 201.748 kb on + strand, within PS417_00900 at 201.749 kb on - strand, within PS417_00900 at 202.129 kb on + strand at 202.217 kb on + strand at 202.238 kb on + strand at 202.296 kb on + strand at 202.679 kb on + strand, within PS417_00905 at 202.679 kb on + strand, within PS417_00905 at 202.940 kb on - strand, within PS417_00905 at 203.117 kb on + strand, within PS417_00905 at 203.228 kb on + strand, within PS417_00905 at 203.229 kb on - strand, within PS417_00905 at 203.246 kb on + strand, within PS417_00905 at 203.246 kb on + strand, within PS417_00905 at 203.247 kb on - strand, within PS417_00905 at 203.352 kb on + strand, within PS417_00905 at 203.525 kb on + strand at 203.526 kb on - strand at 203.526 kb on - strand at 203.630 kb on + strand, within PS417_00910 at 203.631 kb on - strand, within PS417_00910 at 203.787 kb on + strand, within PS417_00910 at 204.071 kb on + strand, within PS417_00910 at 204.071 kb on + strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.179 kb on + strand, within PS417_00910 at 204.180 kb on - strand, within PS417_00910 at 204.266 kb on + strand, within PS417_00910 at 204.281 kb on + strand, within PS417_00910 at 204.281 kb on + strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 201,710 - PS417_00900 0.67 +2.3 201,748 + PS417_00900 0.70 +1.7 201,749 - PS417_00900 0.70 -0.4 202,129 + +1.4 202,217 + +0.8 202,238 + +1.5 202,296 + -0.0 202,679 + PS417_00905 0.34 +0.1 202,679 + PS417_00905 0.34 -0.9 202,940 - PS417_00905 0.55 -0.5 203,117 + PS417_00905 0.70 +0.4 203,228 + PS417_00905 0.79 -2.3 203,229 - PS417_00905 0.79 +1.5 203,246 + PS417_00905 0.81 -0.7 203,246 + PS417_00905 0.81 +1.0 203,247 - PS417_00905 0.81 -2.1 203,352 + PS417_00905 0.89 -1.3 203,525 + -1.3 203,526 - -0.8 203,526 - -2.2 203,630 + PS417_00910 0.15 -3.4 203,631 - PS417_00910 0.15 -1.2 203,787 + PS417_00910 0.30 +0.3 204,071 + PS417_00910 0.59 +1.2 204,071 + PS417_00910 0.59 +0.5 204,072 - PS417_00910 0.59 +1.6 204,072 - PS417_00910 0.59 +0.1 204,072 - PS417_00910 0.59 +0.9 204,179 + PS417_00910 0.70 +0.8 204,180 - PS417_00910 0.70 +0.3 204,266 + PS417_00910 0.78 +0.8 204,281 + PS417_00910 0.80 -0.6 204,281 + PS417_00910 0.80 -1.7 204,282 - PS417_00910 0.80 -2.2 204,282 - PS417_00910 0.80 -0.7 204,282 - PS417_00910 0.80 +0.3
Or see this region's nucleotide sequence