Strain Fitness in Pseudomonas simiae WCS417 around PS417_08920

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,942,616	+				-2.0
1,942,616	+				-1.0
1,942,617	-				+0.0
1,942,617	-				+0.6
1,942,617	-				+1.9
1,942,663	+				-2.7
1,942,677	-				+1.1
1,942,677	-				+0.5
1,942,748	+				+0.7
1,942,890	-				-0.4
1,942,890	-				-1.8
1,942,934	+				-1.6
1,942,934	+				-2.9
1,942,934	+				+1.9
1,942,935	-				+0.7
1,942,935	-				+0.3
1,942,994	+				+0.6
1,942,995	-				-0.2
1,943,218	-		PS417_08920	0.20	-1.9
1,943,323	-		PS417_08920	0.28	-1.0
1,943,389	+		PS417_08920	0.33	+1.1
1,943,390	-		PS417_08920	0.33	-0.4
1,943,490	+		PS417_08920	0.41	+0.4
1,943,490	+		PS417_08920	0.41	+1.0
1,943,676	+		PS417_08920	0.55	-2.0
1,943,676	+		PS417_08920	0.55	-2.1
1,943,676	+		PS417_08920	0.55	+0.7
1,943,676	+		PS417_08920	0.55	+1.0
1,943,676	+		PS417_08920	0.55	+0.5
1,943,677	-		PS417_08920	0.55	-0.1
1,943,677	-		PS417_08920	0.55	-1.4
1,943,677	-		PS417_08920	0.55	-2.3
1,943,677	-		PS417_08920	0.55	-0.0
1,943,677	-		PS417_08920	0.55	+0.4
1,943,679	-		PS417_08920	0.55	-0.9
1,943,757	+		PS417_08920	0.61	-1.1
1,943,757	+		PS417_08920	0.61	+1.3
1,943,757	+		PS417_08920	0.61	-0.7
1,943,757	+		PS417_08920	0.61	+0.8
1,943,757	+		PS417_08920	0.61	-2.2
1,943,863	-		PS417_08920	0.69	+0.4
1,944,057	-		PS417_08920	0.84	-1.3
1,944,233	+				-4.8
1,944,234	-				-1.6
1,944,234	-				+0.3
1,944,234	-				-1.1
1,944,234	-				-0.6
1,944,298	+				+0.0
1,944,299	-				+0.4
1,944,329	-				-0.9
1,944,346	+				+0.6
1,944,347	-				+4.1
1,944,415	+				-1.4
1,944,742	+		PS417_08925	0.42	+1.3
1,944,816	-		PS417_08925	0.52	-1.4
1,944,816	-		PS417_08925	0.52	-2.9
1,944,851	+		PS417_08925	0.57	-1.1
1,944,995	+		PS417_08925	0.76	-2.5
1,944,995	+		PS417_08925	0.76	-2.7
1,944,996	-		PS417_08925	0.76	-0.4
1,945,121	+				+0.0
1,945,121	+				-0.1
1,945,122	-				-1.4
1,945,122	-				-0.3
1,945,169	+				-1.5
1,945,173	+				+0.6
1,945,174	-				-0.6
1,945,217	+				-0.2
1,945,245	+				-0.6
1,945,245	+				+0.2
1,945,245	+				-1.0