Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00840 and PS417_00845 are separated by 76 nucleotides PS417_00845 and PS417_00850 are separated by 69 nucleotides PS417_00850 and PS417_00855 overlap by 38 nucleotides PS417_00855 and PS417_00860 are separated by 92 nucleotides
PS417_00840: PS417_00840 - hypothetical protein, at 186,254 to 190,063
_00840
PS417_00845: PS417_00845 - transcriptional regulator, at 190,140 to 190,505
_00845
PS417_00850: PS417_00850 - hypothetical protein, at 190,575 to 190,763
_00850
PS417_00855: PS417_00855 - chromosome segregation protein SMC, at 190,726 to 191,670
_00855
PS417_00860: PS417_00860 - hypothetical protein, at 191,763 to 194,669
_00860
Position (kb) 190
191
192 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 189.762 kb on - strand at 189.762 kb on - strand at 189.854 kb on - strand at 189.921 kb on + strand at 189.922 kb on - strand at 190.010 kb on + strand at 190.011 kb on - strand at 190.142 kb on - strand at 190.366 kb on + strand, within PS417_00845 at 190.437 kb on + strand, within PS417_00845 at 190.531 kb on - strand at 190.577 kb on - strand at 190.856 kb on + strand, within PS417_00855 at 190.942 kb on + strand, within PS417_00855 at 190.990 kb on + strand, within PS417_00855 at 191.076 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.106 kb on + strand, within PS417_00855 at 191.110 kb on + strand, within PS417_00855 at 191.110 kb on + strand, within PS417_00855 at 191.163 kb on + strand, within PS417_00855 at 191.164 kb on - strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.474 kb on - strand, within PS417_00855 at 191.608 kb on + strand at 191.676 kb on + strand at 191.677 kb on - strand at 191.807 kb on + strand at 191.815 kb on + strand at 191.815 kb on + strand at 191.815 kb on + strand at 191.816 kb on - strand at 191.886 kb on + strand at 191.886 kb on + strand at 191.886 kb on + strand at 191.971 kb on + strand at 191.971 kb on + strand at 191.974 kb on + strand at 191.975 kb on - strand at 191.975 kb on - strand at 192.449 kb on - strand, within PS417_00860 at 192.564 kb on + strand, within PS417_00860
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 189,762 - +0.8 189,762 - +0.3 189,854 - +1.9 189,921 + -0.4 189,922 - +0.4 190,010 + -1.6 190,011 - +1.3 190,142 - +0.3 190,366 + PS417_00845 0.62 +0.0 190,437 + PS417_00845 0.81 +1.1 190,531 - +2.0 190,577 - -0.8 190,856 + PS417_00855 0.14 +2.4 190,942 + PS417_00855 0.23 +0.1 190,990 + PS417_00855 0.28 -0.1 191,076 + PS417_00855 0.37 +0.0 191,102 + PS417_00855 0.40 -2.0 191,102 + PS417_00855 0.40 -0.9 191,102 + PS417_00855 0.40 +2.2 191,102 + PS417_00855 0.40 +0.2 191,106 + PS417_00855 0.40 +0.4 191,110 + PS417_00855 0.41 -0.1 191,110 + PS417_00855 0.41 -0.7 191,163 + PS417_00855 0.46 +0.3 191,164 - PS417_00855 0.46 +3.8 191,470 + PS417_00855 0.79 -2.1 191,470 + PS417_00855 0.79 -1.0 191,470 + PS417_00855 0.79 -3.4 191,470 + PS417_00855 0.79 +1.1 191,474 - PS417_00855 0.79 +2.8 191,608 + -0.7 191,676 + +0.1 191,677 - +4.6 191,807 + -0.4 191,815 + +0.3 191,815 + -0.1 191,815 + +1.2 191,816 - +4.0 191,886 + -1.5 191,886 + -0.1 191,886 + +0.2 191,971 + -3.1 191,971 + -0.3 191,974 + -2.1 191,975 - +4.6 191,975 - +5.4 192,449 - PS417_00860 0.24 +2.4 192,564 + PS417_00860 0.28 -0.7
Or see this region's nucleotide sequence