Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00830 and PS417_00835 are separated by 483 nucleotides PS417_00835 and PS417_00840 are separated by 419 nucleotides
PS417_00830: PS417_00830 - hypothetical protein, at 183,570 to 184,313
_00830
PS417_00835: PS417_00835 - hypothetical protein, at 184,797 to 185,834
_00835
PS417_00840: PS417_00840 - hypothetical protein, at 186,254 to 190,063
_00840
Position (kb) 184
185
186 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 184.121 kb on - strand, within PS417_00830 at 184.121 kb on - strand, within PS417_00830 at 184.261 kb on - strand at 184.261 kb on - strand at 184.355 kb on + strand at 184.355 kb on + strand at 184.356 kb on - strand at 184.359 kb on + strand at 184.382 kb on - strand at 184.501 kb on + strand at 184.570 kb on - strand at 184.625 kb on - strand at 184.626 kb on + strand at 184.669 kb on + strand at 184.725 kb on + strand at 185.102 kb on + strand, within PS417_00835 at 185.158 kb on - strand, within PS417_00835 at 185.425 kb on - strand, within PS417_00835 at 185.466 kb on + strand, within PS417_00835 at 185.667 kb on - strand, within PS417_00835 at 185.667 kb on - strand, within PS417_00835 at 185.670 kb on + strand, within PS417_00835 at 185.721 kb on - strand, within PS417_00835 at 185.845 kb on + strand at 185.978 kb on + strand at 185.978 kb on + strand at 185.978 kb on + strand at 185.979 kb on - strand at 186.056 kb on + strand at 186.117 kb on + strand at 186.118 kb on - strand at 186.121 kb on + strand at 186.136 kb on - strand at 186.186 kb on - strand at 186.186 kb on - strand at 186.211 kb on - strand at 186.222 kb on - strand at 186.240 kb on - strand at 186.321 kb on + strand at 186.394 kb on + strand at 186.394 kb on + strand at 186.395 kb on - strand at 186.395 kb on - strand at 186.395 kb on - strand at 186.483 kb on + strand at 186.483 kb on + strand at 186.483 kb on + strand at 186.484 kb on - strand at 186.484 kb on - strand at 186.487 kb on + strand at 186.488 kb on - strand at 186.488 kb on - strand at 186.488 kb on - strand at 186.509 kb on - strand at 186.525 kb on - strand at 186.525 kb on - strand at 186.525 kb on - strand at 186.579 kb on + strand at 186.579 kb on + strand at 186.579 kb on + strand at 186.579 kb on + strand at 186.651 kb on + strand, within PS417_00840 at 186.687 kb on + strand, within PS417_00840 at 186.687 kb on + strand, within PS417_00840 at 186.688 kb on - strand, within PS417_00840 at 186.688 kb on - strand, within PS417_00840 at 186.760 kb on + strand, within PS417_00840 at 186.761 kb on - strand, within PS417_00840 at 186.763 kb on - strand, within PS417_00840 at 186.826 kb on + strand, within PS417_00840
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 184,121 - PS417_00830 0.74 +0.0 184,121 - PS417_00830 0.74 +0.8 184,261 - +0.8 184,261 - +0.3 184,355 + -1.7 184,355 + +0.8 184,356 - -0.1 184,359 + +1.0 184,382 - -1.5 184,501 + +0.3 184,570 - -1.7 184,625 - +0.8 184,626 + +0.6 184,669 + -1.0 184,725 + -1.3 185,102 + PS417_00835 0.29 -0.1 185,158 - PS417_00835 0.35 -2.4 185,425 - PS417_00835 0.61 -4.0 185,466 + PS417_00835 0.64 -0.4 185,667 - PS417_00835 0.84 -0.5 185,667 - PS417_00835 0.84 -0.1 185,670 + PS417_00835 0.84 +0.6 185,721 - PS417_00835 0.89 -1.2 185,845 + -0.3 185,978 + -0.7 185,978 + -1.8 185,978 + -1.3 185,979 - +0.9 186,056 + -1.3 186,117 + +1.6 186,118 - -0.4 186,121 + +0.1 186,136 - -2.1 186,186 - +0.1 186,186 - -1.8 186,211 - -1.8 186,222 - -1.5 186,240 - +0.7 186,321 + -3.2 186,394 + -2.5 186,394 + +2.8 186,395 - +1.2 186,395 - -2.1 186,395 - -1.3 186,483 + -0.5 186,483 + +1.7 186,483 + -0.8 186,484 - -3.2 186,484 - -2.4 186,487 + +0.6 186,488 - -0.2 186,488 - +0.8 186,488 - -1.5 186,509 - -0.0 186,525 - -2.1 186,525 - +0.1 186,525 - -1.4 186,579 + +0.3 186,579 + -1.5 186,579 + -1.5 186,579 + -0.8 186,651 + PS417_00840 0.10 -0.5 186,687 + PS417_00840 0.11 +1.5 186,687 + PS417_00840 0.11 +0.5 186,688 - PS417_00840 0.11 -0.2 186,688 - PS417_00840 0.11 -0.4 186,760 + PS417_00840 0.13 +0.1 186,761 - PS417_00840 0.13 +0.3 186,763 - PS417_00840 0.13 -0.3 186,826 + PS417_00840 0.15 +0.3
Or see this region's nucleotide sequence