Strain Fitness in Pseudomonas simiae WCS417 around PS417_08390

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,838,635	-		PS417_08385	0.12	+0.4
1,838,671	+				+1.9
1,838,689	-		PS417_08385	0.18	-0.7
1,838,751	-		PS417_08385	0.24	+1.2
1,838,751	-		PS417_08385	0.24	-1.1
1,839,092	+		PS417_08385	0.59	+1.8
1,839,092	+		PS417_08385	0.59	+0.3
1,839,092	+				-0.1
1,839,092	+		PS417_08385	0.59	+1.2
1,839,095	-		PS417_08385	0.59	-1.1
1,839,180	+		PS417_08385	0.68	+0.1
1,839,181	-		PS417_08385	0.68	-2.8
1,839,181	-		PS417_08385	0.68	-2.5
1,839,181	-		PS417_08385	0.68	-2.1
1,839,456	-				+1.2
1,839,488	-				-2.1
1,839,488	-				-0.6
1,839,502	-				+0.8
1,839,502	-				+0.6
1,839,519	+				+0.6
1,839,575	+				-2.5
1,839,576	-				+0.3
1,839,576	-				+1.2
1,839,576	-				-0.4
1,839,660	+		PS417_08390	0.12	+0.4
1,839,660	+		PS417_08390	0.12	-1.1
1,839,831	+		PS417_08390	0.48	+0.9
1,839,831	+		PS417_08390	0.48	+1.7
1,839,831	+		PS417_08390	0.48	+0.7
1,839,832	-		PS417_08390	0.48	+0.7
1,839,832	-		PS417_08390	0.48	+0.6
1,839,925	-		PS417_08390	0.68	+1.7
1,839,936	+		PS417_08390	0.70	+1.2
1,839,951	+		PS417_08390	0.73	+0.1
1,839,951	+		PS417_08390	0.73	-2.8
1,839,951	+		PS417_08390	0.73	+0.9
1,840,000	+		PS417_08390	0.84	+1.2
1,840,066	-				+1.1
1,840,098	+				-3.2
1,840,200	+				+0.7
1,840,264	+				-0.7
1,840,264	+				-0.7
1,840,486	+		PS417_08395	0.14	-0.9
1,840,486	+		PS417_08395	0.14	+0.9
1,840,486	+		PS417_08395	0.14	+0.8
1,840,487	-		PS417_08395	0.15	+0.3
1,840,487	-		PS417_08395	0.15	-1.6
1,840,618	+		PS417_08395	0.20	+0.9
1,840,633	+		PS417_08395	0.20	+0.9
1,840,633	+		PS417_08395	0.20	-0.1
1,840,634	-		PS417_08395	0.20	-3.6
1,840,634	-		PS417_08395	0.20	-0.4
1,840,982	+		PS417_08395	0.34	+0.6