Strain Fitness in Pseudomonas simiae WCS417 around PS417_08345

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,828,858	+		PS417_08340	0.85	+1.2
1,828,858	+		PS417_08340	0.85	-1.4
1,828,858	+		PS417_08340	0.85	+2.0
1,828,858	+		PS417_08340	0.85	-0.2
1,828,859	-		PS417_08340	0.85	-0.2
1,828,859	-		PS417_08340	0.85	+0.4
1,828,906	+		PS417_08340	0.86	+1.0
1,828,907	-		PS417_08340	0.86	-1.7
1,828,936	+		PS417_08340	0.87	-0.3
1,828,937	-		PS417_08340	0.87	+0.5
1,829,089	+		PS417_08340	0.90	+1.8
1,829,098	+				-2.4
1,829,098	+				-1.0
1,829,099	-				-1.1
1,829,099	-				+0.2
1,829,135	-				-0.8
1,829,268	-				-0.0
1,829,410	-				-0.5
1,829,764	+				-1.7
1,829,765	-				-0.7
1,830,528	+		PS417_08345	0.52	+0.4
1,830,528	+		PS417_08345	0.52	-1.8
1,830,528	+		PS417_08345	0.52	-1.7
1,830,708	+		PS417_08345	0.64	+0.9
1,830,709	-		PS417_08345	0.64	-0.0
1,830,817	+		PS417_08345	0.71	-2.0
1,830,818	-		PS417_08345	0.71	+0.7
1,830,818	-		PS417_08345	0.71	+0.6
1,830,818	-		PS417_08345	0.71	-0.7
1,830,818	-		PS417_08345	0.71	+0.7
1,830,818	-		PS417_08345	0.71	+0.7
1,830,818	-		PS417_08345	0.71	-0.5
1,830,881	-		PS417_08345	0.75	-0.4
1,830,881	-		PS417_08345	0.75	-2.7
1,830,881	-		PS417_08345	0.75	-1.1
1,830,944	+				-0.7
1,831,080	+		PS417_08345	0.89	-0.5
1,831,153	+				-0.7
1,831,153	+				-1.1
1,831,153	+				-0.7
1,831,153	+				+0.8
1,831,173	-				-2.7
1,831,223	+				+0.4
1,831,223	+				-2.7
1,831,224	-				-0.6
1,831,457	-		PS417_08350	0.14	-1.9
1,831,513	+		PS417_08350	0.21	-2.3
1,831,514	-		PS417_08350	0.21	-4.3
1,831,639	+		PS417_08350	0.37	-0.3
1,831,998	+		PS417_08350	0.81	-0.8
1,832,068	+				+0.2
1,832,082	+				+0.9
1,832,082	+				+0.7
1,832,196	-				-0.4
1,832,198	-				+0.1
1,832,214	+				+1.7
1,832,214	+				-1.1
1,832,215	-				-1.7
1,832,225	-				+0.9
1,832,226	+				+0.9