Strain Fitness in Pseudomonas simiae WCS417 around PS417_07800

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,714,073	+		PS417_07790	0.78	+0.2
1,714,073	+		PS417_07790	0.78	+0.9
1,714,073	+		PS417_07790	0.78	-1.8
1,714,111	-		PS417_07790	0.81	-1.0
1,714,125	-		PS417_07790	0.81	+0.4
1,714,224	+		PS417_07790	0.87	+1.0
1,714,232	+		PS417_07790	0.87	-1.7
1,714,397	+				+0.2
1,714,397	+				+0.4
1,714,397	+				+0.7
1,714,398	-				+0.1
1,714,398	-				-0.9
1,714,400	+				-0.7
1,714,400	+				-0.1
1,714,440	-				+1.2
1,714,542	-				-2.2
1,714,577	-				-0.3
1,714,584	+				-0.7
1,714,627	+				+1.8
1,714,729	+				+0.9
1,714,730	-				+0.7
1,714,912	+		PS417_07795	0.63	-0.5
1,714,912	+		PS417_07795	0.63	-3.5
1,714,912	+		PS417_07795	0.63	+1.5
1,714,918	+		PS417_07795	0.65	+1.6
1,714,919	-		PS417_07795	0.66	-1.6
1,714,999	+				+4.3
1,715,000	-				+0.4
1,715,041	+				-0.1
1,715,051	-				-0.2
1,715,051	-				+1.0
1,715,103	-				+0.7
1,715,136	+				+1.0
1,715,139	-				-2.3
1,715,139	-				+4.6
1,715,139	-				-0.3
1,715,139	-				+0.0
1,715,139	-				+0.8
1,715,142	+				+1.4
1,715,143	-				-0.4
1,715,143	-				+2.0
1,715,243	+		PS417_07800	0.18	+0.3
1,715,243	+		PS417_07800	0.18	+0.1
1,715,243	+		PS417_07800	0.18	+3.0
1,715,254	+		PS417_07800	0.19	+0.5
1,715,255	-		PS417_07800	0.19	+0.6
1,715,298	+		PS417_07800	0.24	-1.3
1,715,299	-		PS417_07800	0.24	-4.9
1,715,356	+		PS417_07800	0.30	-1.2
1,715,357	-		PS417_07800	0.30	+0.2
1,715,357	-		PS417_07800	0.30	+0.7
1,715,357	-		PS417_07800	0.30	+0.9
1,715,357	-		PS417_07800	0.30	-1.2
1,715,366	-		PS417_07800	0.31	+0.4
1,715,421	+		PS417_07800	0.37	+1.8
1,715,421	+		PS417_07800	0.37	-0.0
1,715,422	-		PS417_07800	0.37	+1.8
1,715,422	-		PS417_07800	0.37	+2.1
1,715,428	-		PS417_07800	0.37	+0.4
1,715,486	+		PS417_07800	0.44	-0.5
1,715,487	-		PS417_07800	0.44	+0.8
1,715,521	+		PS417_07800	0.47	+0.3
1,715,576	-				-0.6
1,715,611	-		PS417_07800	0.57	-0.6
1,715,643	+				-0.0
1,715,643	+		PS417_07800	0.60	-0.7
1,715,643	+		PS417_07800	0.60	+0.3
1,715,643	+		PS417_07800	0.60	-2.3
1,715,643	+		PS417_07800	0.60	-0.3
1,715,643	+		PS417_07800	0.60	-1.7
1,715,644	-		PS417_07800	0.60	+0.1
1,715,644	-		PS417_07800	0.60	-1.0
1,715,644	-		PS417_07800	0.60	-0.0
1,715,745	+		PS417_07800	0.71	-0.6
1,715,750	+		PS417_07800	0.71	+0.9
1,715,783	-		PS417_07800	0.75	+2.0
1,715,788	+		PS417_07800	0.75	+0.2
1,715,789	-		PS417_07800	0.76	-0.1
1,715,789	-		PS417_07800	0.76	+0.9
1,715,789	-		PS417_07800	0.76	+0.7
1,715,868	-		PS417_07800	0.84	+1.0
1,715,937	+				+1.1
1,715,949	-				+2.1
1,715,949	-				-0.4
1,715,969	+				-3.2
1,715,969	+				+0.9
1,715,970	-				-0.6
1,715,970	-				-2.6
1,716,027	+				+0.1
1,716,027	+				-0.4
1,716,027	+				+0.2
1,716,038	+				-0.3
1,716,038	+				-4.2
1,716,038	+				+2.6
1,716,038	+				+1.3
1,716,039	-				+0.5
1,716,039	-				-1.6
1,716,161	+				-0.8
1,716,166	+				-1.2
1,716,166	+				-1.3
1,716,246	+		PS417_07805	0.15	+1.4
1,716,246	+		PS417_07805	0.15	-0.2
1,716,246	+		PS417_07805	0.15	+1.5
1,716,246	+				+0.0
1,716,246	+		PS417_07805	0.15	-0.1
1,716,247	-		PS417_07805	0.15	+0.0
1,716,247	-		PS417_07805	0.15	+1.0
1,716,292	+		PS417_07805	0.21	+0.1
1,716,292	+		PS417_07805	0.21	+2.0
1,716,293	-		PS417_07805	0.22	-0.2
1,716,293	-		PS417_07805	0.22	+0.7
1,716,295	+		PS417_07805	0.22	-0.3
1,716,296	-		PS417_07805	0.22	+0.3
1,716,352	-		PS417_07805	0.30	-2.2
1,716,367	+		PS417_07805	0.32	+0.0
1,716,367	+		PS417_07805	0.32	-2.7
1,716,368	-		PS417_07805	0.32	+0.4
1,716,660	-				+2.2
1,716,691	+		PS417_07805	0.77	-1.6
1,716,726	+		PS417_07805	0.82	+1.3
1,716,728	+		PS417_07805	0.83	-0.5
1,716,732	+		PS417_07805	0.83	+1.3
1,716,733	-		PS417_07805	0.83	-0.0
1,716,733	-		PS417_07805	0.83	+1.5
1,716,733	-				+1.0
1,716,733	-		PS417_07805	0.83	+1.6
1,716,768	+		PS417_07805	0.88	-1.5
1,716,768	+		PS417_07805	0.88	+0.1
1,716,768	+		PS417_07805	0.88	+0.9
1,716,768	+		PS417_07805	0.88	+0.8
1,716,808	+				-0.9
1,716,848	+				-1.5
1,716,997	+				+0.1
1,716,997	+				+0.7
1,716,997	+				-0.3
1,716,998	-				-0.1