Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07530 and PS417_07535 are separated by 140 nucleotides PS417_07535 and PS417_07540 are separated by 53 nucleotides PS417_07540 and PS417_07545 are separated by 267 nucleotides
PS417_07530: PS417_07530 - multidrug transporter, at 1,655,733 to 1,657,127
_07530
PS417_07535: PS417_07535 - erythronate-4-phosphate dehydrogenase, at 1,657,268 to 1,658,410
_07535
PS417_07540: PS417_07540 - multifunctional fatty acid oxidation complex subunit alpha, at 1,658,464 to 1,658,637
_07540
PS417_07545: PS417_07545 - ABC transporter ATP-binding protein, at 1,658,905 to 1,660,680
_07545
Position (kb)
1657
1658
1659 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1656.387 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.430 kb on + strand, within PS417_07530 at 1656.430 kb on + strand, within PS417_07530 at 1656.430 kb on + strand at 1656.430 kb on + strand, within PS417_07530 at 1656.448 kb on + strand, within PS417_07530 at 1656.562 kb on + strand, within PS417_07530 at 1656.574 kb on + strand at 1656.667 kb on + strand, within PS417_07530 at 1656.667 kb on + strand, within PS417_07530 at 1656.668 kb on - strand, within PS417_07530 at 1656.670 kb on + strand, within PS417_07530 at 1656.671 kb on - strand, within PS417_07530 at 1656.713 kb on - strand at 1656.926 kb on - strand, within PS417_07530 at 1657.129 kb on + strand at 1657.130 kb on - strand at 1657.130 kb on - strand at 1657.130 kb on - strand at 1657.142 kb on + strand at 1657.143 kb on - strand at 1657.170 kb on + strand at 1658.566 kb on - strand, within PS417_07540 at 1658.567 kb on + strand, within PS417_07540 at 1658.567 kb on + strand, within PS417_07540 at 1658.568 kb on - strand, within PS417_07540 at 1658.663 kb on - strand at 1658.663 kb on - strand at 1658.666 kb on + strand at 1658.666 kb on + strand at 1658.666 kb on + strand at 1658.667 kb on - strand at 1658.667 kb on - strand at 1658.667 kb on - strand at 1658.675 kb on + strand at 1658.678 kb on + strand at 1658.678 kb on + strand at 1658.678 kb on + strand at 1658.708 kb on + strand at 1658.709 kb on - strand at 1658.709 kb on - strand at 1658.797 kb on - strand at 1658.819 kb on - strand at 1658.819 kb on - strand at 1658.839 kb on - strand at 1658.839 kb on - strand at 1658.870 kb on - strand at 1658.870 kb on - strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.878 kb on - strand at 1658.878 kb on - strand at 1658.963 kb on - strand at 1659.016 kb on - strand at 1659.016 kb on - strand at 1659.155 kb on - strand, within PS417_07545 at 1659.155 kb on - strand, within PS417_07545 at 1659.241 kb on + strand at 1659.308 kb on + strand at 1659.339 kb on + strand, within PS417_07545
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 1,656,387 + PS417_07530 0.47 +0.2 1,656,387 + PS417_07530 0.47 +0.5 1,656,387 + PS417_07530 0.47 -1.3 1,656,430 + PS417_07530 0.50 -0.6 1,656,430 + PS417_07530 0.50 -2.6 1,656,430 + +2.4 1,656,430 + PS417_07530 0.50 -0.8 1,656,448 + PS417_07530 0.51 +1.4 1,656,562 + PS417_07530 0.59 +0.5 1,656,574 + -1.3 1,656,667 + PS417_07530 0.67 -1.5 1,656,667 + PS417_07530 0.67 -0.7 1,656,668 - PS417_07530 0.67 +0.5 1,656,670 + PS417_07530 0.67 -2.3 1,656,671 - PS417_07530 0.67 -0.9 1,656,713 - -1.6 1,656,926 - PS417_07530 0.86 -2.5 1,657,129 + +0.8 1,657,130 - -3.7 1,657,130 - +1.0 1,657,130 - +0.6 1,657,142 + +1.0 1,657,143 - -0.4 1,657,170 + -2.3 1,658,566 - PS417_07540 0.59 +0.6 1,658,567 + PS417_07540 0.59 -1.6 1,658,567 + PS417_07540 0.59 +1.3 1,658,568 - PS417_07540 0.60 +3.0 1,658,663 - -3.0 1,658,663 - +1.1 1,658,666 + -0.3 1,658,666 + +1.3 1,658,666 + -1.6 1,658,667 - +0.4 1,658,667 - +0.5 1,658,667 - -0.4 1,658,675 + -2.0 1,658,678 + -1.3 1,658,678 + -0.0 1,658,678 + +0.3 1,658,708 + +0.5 1,658,709 - -0.1 1,658,709 - +1.0 1,658,797 - -1.0 1,658,819 - -1.8 1,658,819 - +1.0 1,658,839 - +1.5 1,658,839 - -0.4 1,658,870 - +0.4 1,658,870 - -2.8 1,658,877 + -0.0 1,658,877 + -0.6 1,658,877 + -1.0 1,658,877 + -3.3 1,658,877 + +0.5 1,658,878 - +1.2 1,658,878 - -1.7 1,658,963 - +0.1 1,659,016 - -0.1 1,659,016 - -0.1 1,659,155 - PS417_07545 0.14 -1.8 1,659,155 - PS417_07545 0.14 -0.7 1,659,241 + -0.0 1,659,308 + -0.0 1,659,339 + PS417_07545 0.24 -2.3
Or see this region's nucleotide sequence