Strain Fitness in Pseudomonas simiae WCS417 around PS417_07535

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,656,387	+		PS417_07530	0.47	+0.2
1,656,387	+		PS417_07530	0.47	+0.5
1,656,387	+		PS417_07530	0.47	-1.3
1,656,430	+		PS417_07530	0.50	-0.6
1,656,430	+		PS417_07530	0.50	-2.6
1,656,430	+				+2.4
1,656,430	+		PS417_07530	0.50	-0.8
1,656,448	+		PS417_07530	0.51	+1.4
1,656,562	+		PS417_07530	0.59	+0.5
1,656,574	+				-1.3
1,656,667	+		PS417_07530	0.67	-1.5
1,656,667	+		PS417_07530	0.67	-0.7
1,656,668	-		PS417_07530	0.67	+0.5
1,656,670	+		PS417_07530	0.67	-2.3
1,656,671	-		PS417_07530	0.67	-0.9
1,656,713	-				-1.6
1,656,926	-		PS417_07530	0.86	-2.5
1,657,129	+				+0.8
1,657,130	-				-3.7
1,657,130	-				+1.0
1,657,130	-				+0.6
1,657,142	+				+1.0
1,657,143	-				-0.4
1,657,170	+				-2.3
1,658,566	-		PS417_07540	0.59	+0.6
1,658,567	+		PS417_07540	0.59	-1.6
1,658,567	+		PS417_07540	0.59	+1.3
1,658,568	-		PS417_07540	0.60	+3.0
1,658,663	-				-3.0
1,658,663	-				+1.1
1,658,666	+				-0.3
1,658,666	+				+1.3
1,658,666	+				-1.6
1,658,667	-				+0.4
1,658,667	-				+0.5
1,658,667	-				-0.4
1,658,675	+				-2.0
1,658,678	+				-1.3
1,658,678	+				-0.0
1,658,678	+				+0.3
1,658,708	+				+0.5
1,658,709	-				-0.1
1,658,709	-				+1.0
1,658,797	-				-1.0
1,658,819	-				-1.8
1,658,819	-				+1.0
1,658,839	-				+1.5
1,658,839	-				-0.4
1,658,870	-				+0.4
1,658,870	-				-2.8
1,658,877	+				-0.0
1,658,877	+				-0.6
1,658,877	+				-1.0
1,658,877	+				-3.3
1,658,877	+				+0.5
1,658,878	-				+1.2
1,658,878	-				-1.7
1,658,963	-				+0.1
1,659,016	-				-0.1
1,659,016	-				-0.1
1,659,155	-		PS417_07545	0.14	-1.8
1,659,155	-		PS417_07545	0.14	-0.7
1,659,241	+				-0.0
1,659,308	+				-0.0
1,659,339	+		PS417_07545	0.24	-2.3