Strain Fitness in Pseudomonas simiae WCS417 around PS417_07425

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,633,979	+		PS417_07415	0.36	-0.8
1,633,979	+		PS417_07415	0.36	+0.1
1,634,003	+		PS417_07415	0.41	+0.3
1,634,168	+		PS417_07415	0.76	+0.5
1,634,241	+				-0.6
1,634,243	+				-0.8
1,634,244	-				-1.3
1,634,244	-				-0.1
1,634,244	-				-2.8
1,634,244	-				+1.1
1,634,244	-				-0.6
1,634,244	-				-0.2
1,634,309	+				-0.1
1,634,492	-		PS417_07420	0.12	-0.4
1,634,492	-		PS417_07420	0.12	-3.0
1,634,542	-				+1.0
1,634,542	-		PS417_07420	0.25	+0.8
1,634,557	-		PS417_07420	0.29	-0.6
1,634,557	-				-0.0
1,634,651	+		PS417_07420	0.54	-2.1
1,634,715	+		PS417_07420	0.71	-1.8
1,634,988	+				+1.2
1,635,071	-		PS417_07425	0.16	+0.5
1,635,073	+		PS417_07425	0.17	-1.6
1,635,073	+		PS417_07425	0.17	-0.8
1,635,268	+		PS417_07425	0.38	-0.2
1,635,268	+		PS417_07425	0.38	+0.1
1,635,269	-		PS417_07425	0.38	+0.0
1,635,269	-		PS417_07425	0.38	-1.1
1,635,269	-		PS417_07425	0.38	-0.4
1,635,520	+		PS417_07425	0.65	-0.7
1,635,520	+		PS417_07425	0.65	+0.8
1,635,520	+		PS417_07425	0.65	-0.2
1,635,521	-		PS417_07425	0.65	-0.0
1,635,521	-		PS417_07425	0.65	-0.1
1,635,589	+		PS417_07425	0.73	+0.1
1,635,589	+				+1.6
1,635,590	-		PS417_07425	0.73	-2.8
1,635,590	-		PS417_07425	0.73	-1.6
1,635,632	-		PS417_07425	0.77	-1.7
1,635,632	-		PS417_07425	0.77	+1.6
1,635,808	+				-0.7
1,635,809	-				-0.8
1,635,809	-				+0.6
1,635,944	+				-0.0
1,635,944	+				-0.7
1,635,944	+				-0.6
1,635,945	-				-0.6
1,636,687	+				+2.0
1,636,687	+				-1.1
1,636,741	+				+0.5