Strain Fitness in Pseudomonas simiae WCS417 around PS417_07280

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,604,368	+		PS417_07270	0.74	-0.9
1,604,369	-		PS417_07270	0.74	-1.3
1,604,369	-		PS417_07270	0.74	-0.3
1,604,425	+		PS417_07270	0.80	-1.8
1,604,616	+				+0.2
1,604,617	-				-2.8
1,604,617	-				+0.4
1,604,617	-				-0.2
1,604,617	-				-3.4
1,604,618	+				-1.2
1,604,619	-				+0.5
1,604,619	-				-0.4
1,604,619	-				+0.0
1,604,622	+				+0.9
1,604,622	+				+0.2
1,604,623	-				+2.6
1,604,623	-				-0.4
1,604,623	-				+0.2
1,604,623	-				-1.3
1,604,623	-				+0.0
1,604,623	-				+0.7
1,604,677	+				-0.0
1,604,678	-				-0.4
1,604,678	-				-2.0
1,604,678	-				-1.0
1,604,853	-		PS417_07275	0.54	-0.5
1,604,975	+		PS417_07275	0.88	+0.2
1,604,975	+		PS417_07275	0.88	+0.0
1,605,000	+				+0.9
1,605,038	+				+0.7
1,605,261	+		PS417_07280	0.24	-1.0
1,605,261	+		PS417_07280	0.24	-0.6
1,605,262	-		PS417_07280	0.25	-2.3
1,605,747	+		PS417_07280	0.76	+1.2
1,605,748	-		PS417_07280	0.76	-1.7
1,605,765	+		PS417_07280	0.78	-0.0
1,605,765	+		PS417_07280	0.78	+0.4
1,605,766	-		PS417_07280	0.78	-0.0
1,605,766	-		PS417_07280	0.78	-0.8
1,605,796	+		PS417_07280	0.82	-1.4
1,605,820	+		PS417_07280	0.84	+1.0
1,605,956	-				-2.1
1,605,956	-				+1.0
1,605,980	+				-2.1
1,606,004	-				-1.3
1,606,015	+				-2.2
1,606,015	+				-1.2
1,606,016	-				+0.1
1,606,016	-				-3.6
1,606,016	-				+1.3
1,606,016	-				-1.4
1,606,043	+				+1.8
1,606,055	+				+0.5
1,606,087	-				-1.2
1,606,113	+				+0.6
1,606,586	+		PS417_07285	0.40	-1.8
1,606,586	+				+0.0
1,606,586	+		PS417_07285	0.40	+1.6
1,606,587	-		PS417_07285	0.41	-1.8
1,606,587	-		PS417_07285	0.41	+1.0
1,606,590	-		PS417_07285	0.41	-3.7
1,606,610	-		PS417_07285	0.43	-0.8
1,606,620	-		PS417_07285	0.43	-0.3
1,606,871	+		PS417_07285	0.64	+1.0