Strain Fitness in Pseudomonas simiae WCS417 around PS417_06625

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,464,825	+				+1.3
1,464,825	+				-3.2
1,464,826	-				-2.0
1,464,829	-				+0.1
1,464,829	-				+0.3
1,464,835	-				+0.1
1,464,854	+				+2.0
1,464,855	-				-0.9
1,464,855	-				-0.4
1,464,862	+				-0.9
1,464,872	-				+0.7
1,464,911	-				-1.7
1,465,056	-				+0.9
1,465,196	+				+0.7
1,465,197	-				-0.3
1,465,207	-				-1.6
1,465,237	+		PS417_06620	0.18	-0.8
1,465,279	+		PS417_06620	0.32	-0.9
1,465,337	+				-1.2
1,465,338	-		PS417_06620	0.51	+1.2
1,465,482	+				+0.6
1,465,482	+				-0.4
1,465,483	-				+0.7
1,465,525	+				-1.2
1,465,525	+				+0.6
1,465,525	+				-0.7
1,465,525	+				+0.4
1,465,542	-				+0.1
1,465,674	+				-1.4
1,465,795	+				-1.9
1,465,796	-				+1.4
1,465,858	+				+0.9
1,465,874	-				-1.2
1,465,960	+				+0.5
1,465,972	+				+1.0
1,465,973	-				-0.0
1,465,973	-				-3.8
1,465,990	+				-2.4
1,466,249	-		PS417_06625	0.21	-0.4
1,466,249	-		PS417_06625	0.21	+0.1
1,466,265	-		PS417_06625	0.22	+1.1
1,466,265	-		PS417_06625	0.22	+1.1
1,466,314	+		PS417_06625	0.24	-3.3
1,466,314	+		PS417_06625	0.24	-1.9
1,466,326	+		PS417_06625	0.24	-0.3
1,466,326	+		PS417_06625	0.24	-0.8
1,466,326	+		PS417_06625	0.24	-0.0
1,466,423	-		PS417_06625	0.29	+0.2
1,466,444	-		PS417_06625	0.30	-1.7
1,466,571	+		PS417_06625	0.36	-2.9
1,466,719	+		PS417_06625	0.42	+0.7
1,466,720	-		PS417_06625	0.43	-1.4
1,466,720	-		PS417_06625	0.43	+0.2
1,466,980	+		PS417_06625	0.54	+1.1
1,466,980	+		PS417_06625	0.54	-0.5
1,466,981	-		PS417_06625	0.54	-1.9
1,467,157	+		PS417_06625	0.63	-0.3
1,467,157	+		PS417_06625	0.63	-2.7
1,467,157	+		PS417_06625	0.63	-0.9
1,467,158	-		PS417_06625	0.63	-0.6
1,467,158	-		PS417_06625	0.63	+0.1
1,467,158	-		PS417_06625	0.63	-0.9
1,467,235	+		PS417_06625	0.66	-2.9
1,467,235	+		PS417_06625	0.66	+0.4
1,467,236	-		PS417_06625	0.66	-1.0
1,467,236	-		PS417_06625	0.66	+1.0
1,467,280	+		PS417_06625	0.68	+0.1
1,467,280	+		PS417_06625	0.68	-0.1
1,467,427	+		PS417_06625	0.75	+0.6
1,467,658	+		PS417_06625	0.86	+1.3
1,467,847	+				+0.4
1,467,847	+				-1.1
1,467,848	-				-3.3
1,467,848	-				-4.2
1,467,854	-				-2.0
1,468,006	+				-2.8
1,468,013	+				+1.4
1,468,043	+				-0.9
1,468,141	+				+0.5
1,468,341	+				-0.4
1,468,341	+				-2.1
1,468,380	+				+0.9
1,468,381	-				-1.9
1,468,518	+		PS417_06630	0.15	+0.4
1,468,552	+		PS417_06630	0.17	-2.4
1,468,553	-		PS417_06630	0.17	-0.7
1,468,567	+		PS417_06630	0.17	-3.7