Strain Fitness in Pseudomonas simiae WCS417 around PS417_06510

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,440,526	-		PS417_06500	0.87	+0.7
1,440,741	+				+2.4
1,440,741	+				+1.7
1,440,741	+				+2.0
1,440,741	+				-3.6
1,440,743	+				+0.4
1,440,927	+		PS417_06505	0.40	+0.1
1,440,927	+		PS417_06505	0.40	+0.4
1,440,928	-		PS417_06505	0.40	+0.1
1,440,951	+		PS417_06505	0.45	-0.7
1,441,170	-				+0.2
1,441,170	-				-1.4
1,441,170	-				-0.5
1,441,170	-				+0.1
1,441,182	+				+0.9
1,441,182	+				-0.6
1,441,182	+				+1.7
1,441,182	+				+0.4
1,441,300	-				-2.7
1,441,518	-				-1.4
1,441,682	+		PS417_06510	0.18	-4.4
1,441,682	+		PS417_06510	0.18	-5.3
1,441,683	-		PS417_06510	0.18	-1.5
1,441,683	-		PS417_06510	0.18	-3.4
1,441,708	-		PS417_06510	0.19	-4.5
1,441,959	-		PS417_06510	0.31	-2.5
1,441,959	-		PS417_06510	0.31	-4.9
1,442,050	-		PS417_06510	0.35	-2.9
1,442,075	+		PS417_06510	0.36	-0.9
1,442,075	+		PS417_06510	0.36	-0.9
1,442,075	+		PS417_06510	0.36	-4.1
1,442,076	-		PS417_06510	0.36	-1.2
1,442,076	-		PS417_06510	0.36	-3.1
1,443,120	+		PS417_06510	0.85	-3.2
1,443,120	+		PS417_06510	0.85	-0.7
1,443,483	-				-0.8
1,443,682	+				+1.9
1,443,682	+				+1.2
1,443,724	-				-2.0
1,443,850	+		PS417_06515	0.14	+4.4
1,444,101	+		PS417_06515	0.24	+0.8
1,444,157	-		PS417_06515	0.27	-2.0
1,444,178	-		PS417_06515	0.28	-2.4
1,444,178	-		PS417_06515	0.28	-3.1
1,444,178	-		PS417_06515	0.28	-0.1
1,444,385	-		PS417_06515	0.37	-0.1
1,444,414	+		PS417_06515	0.38	-3.0