Strain Fitness in Pseudomonas simiae WCS417 around PS417_06435

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,426,843	+		PS417_06430	0.64	-2.9
1,426,843	+		PS417_06430	0.64	-2.0
1,426,844	-		PS417_06430	0.64	+1.9
1,426,844	-		PS417_06430	0.64	-1.2
1,426,902	-		PS417_06430	0.66	-0.5
1,427,227	+		PS417_06430	0.80	-0.2
1,427,253	+		PS417_06430	0.81	-1.5
1,427,279	-		PS417_06430	0.82	+0.4
1,427,299	+		PS417_06430	0.83	-0.9
1,427,300	-		PS417_06430	0.83	-3.1
1,427,300	-		PS417_06430	0.83	-1.1
1,427,300	-		PS417_06430	0.83	+0.5
1,427,300	-		PS417_06430	0.83	-0.0
1,427,339	+		PS417_06430	0.84	+0.2
1,427,340	-		PS417_06430	0.84	+1.4
1,427,342	-		PS417_06430	0.84	-0.5
1,427,342	-		PS417_06430	0.84	+3.4
1,427,763	-				+0.2
1,427,800	+				-0.4
1,427,801	-				+1.1
1,427,801	-				-0.2
1,427,801	-				-0.3
1,427,864	-				+0.1
1,427,972	-		PS417_06435	0.23	-0.2
1,427,972	-		PS417_06435	0.23	+0.8
1,428,050	-		PS417_06435	0.35	+0.8
1,428,073	+		PS417_06435	0.38	-4.0
1,428,073	+		PS417_06435	0.38	+1.4
1,428,074	-		PS417_06435	0.38	-0.7
1,428,199	-				-0.9
1,428,199	-		PS417_06435	0.58	+0.3
1,428,239	-		PS417_06435	0.64	+0.2
1,428,446	+				-1.2
1,428,454	+				-0.4
1,428,458	-				+0.1
1,428,458	-				-1.9
1,428,458	-				+0.2
1,428,510	+				-1.7
1,428,514	+				-0.0
1,428,515	-				+0.6
1,428,516	+				-1.2
1,428,516	+				-2.8
1,428,517	-				-0.5
1,428,517	-				+2.2
1,428,517	-				-4.2
1,428,517	-				-1.3
1,428,517	-				-1.2
1,428,520	+				+0.2
1,428,520	+				-2.0
1,428,520	+				-0.6
1,428,521	-				+1.8
1,428,521	-				-0.0
1,428,567	-				+0.3
1,428,567	-				+1.1
1,428,567	-				-0.0
1,428,577	+				-0.7
1,428,646	+				-0.9
1,428,700	+		PS417_06440	0.16	+0.2
1,428,700	+		PS417_06440	0.16	+0.8
1,428,835	+		PS417_06440	0.33	+1.8
1,428,835	+		PS417_06440	0.33	+0.9
1,428,835	+		PS417_06440	0.33	-3.3
1,428,836	-				+1.1
1,429,117	+		PS417_06440	0.69	-1.0
1,429,117	+		PS417_06440	0.69	+0.2
1,429,118	-		PS417_06440	0.69	+2.5
1,429,118	-		PS417_06440	0.69	-3.3
1,429,218	+		PS417_06440	0.82	-0.4
1,429,219	-		PS417_06440	0.82	-0.7
1,429,326	+				+0.9
1,429,341	+				+1.6
1,429,342	-				-3.1