Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06315 and PS417_06320 overlap by 4 nucleotides PS417_06320 and PS417_06325 are separated by 129 nucleotides PS417_06325 and PS417_06330 are separated by 109 nucleotides
PS417_06315: PS417_06315 - cell division protein FtsB, at 1,403,981 to 1,404,259
_06315
PS417_06320: PS417_06320 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,404,256 to 1,404,963
_06320
PS417_06325: PS417_06325 - LysR family transcriptional regulator, at 1,405,093 to 1,405,989
_06325
PS417_06330: PS417_06330 - S-(hydroxymethyl)glutathione dehydrogenase, at 1,406,099 to 1,407,211
_06330
Position (kb)
1405
1406 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 1405.127 kb on - strand at 1405.184 kb on + strand, within PS417_06325 at 1405.268 kb on + strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.272 kb on - strand, within PS417_06325 at 1405.422 kb on + strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.447 kb on - strand, within PS417_06325 at 1405.472 kb on + strand, within PS417_06325 at 1405.493 kb on + strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1406.122 kb on - strand at 1406.122 kb on - strand at 1406.234 kb on + strand, within PS417_06330 at 1406.236 kb on + strand, within PS417_06330 at 1406.363 kb on + strand at 1406.480 kb on + strand, within PS417_06330 at 1406.504 kb on + strand, within PS417_06330 at 1406.570 kb on - strand, within PS417_06330
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 1,405,127 - -1.8 1,405,184 + PS417_06325 0.10 -4.4 1,405,268 + PS417_06325 0.20 -2.7 1,405,269 - PS417_06325 0.20 -0.9 1,405,269 - PS417_06325 0.20 -4.6 1,405,269 - PS417_06325 0.20 -2.4 1,405,271 + PS417_06325 0.20 -6.1 1,405,271 + PS417_06325 0.20 -1.4 1,405,272 - PS417_06325 0.20 -1.2 1,405,422 + PS417_06325 0.37 -2.4 1,405,423 - PS417_06325 0.37 -3.7 1,405,423 - PS417_06325 0.37 +2.7 1,405,446 + PS417_06325 0.39 -1.7 1,405,446 + PS417_06325 0.39 +0.1 1,405,447 - PS417_06325 0.39 -5.1 1,405,472 + PS417_06325 0.42 -1.7 1,405,493 + PS417_06325 0.45 -2.3 1,405,494 - PS417_06325 0.45 -4.3 1,405,494 - PS417_06325 0.45 -5.2 1,405,494 - PS417_06325 0.45 -2.0 1,406,122 - -3.1 1,406,122 - -0.9 1,406,234 + PS417_06330 0.12 -5.5 1,406,236 + PS417_06330 0.12 -1.0 1,406,363 + +0.1 1,406,480 + PS417_06330 0.34 -4.3 1,406,504 + PS417_06330 0.36 -3.9 1,406,570 - PS417_06330 0.42 -2.7
Or see this region's nucleotide sequence