Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00595 and PS417_00600 are separated by 45 nucleotides PS417_00600 and PS417_00605 are separated by 18 nucleotides
PS417_00595: PS417_00595 - chemotaxis protein, at 119,360 to 121,240
_00595
PS417_00600: PS417_00600 - polyketide cyclase, at 121,286 to 121,744
_00600
PS417_00605: PS417_00605 - peptide transporter, at 121,763 to 125,140
_00605
Position (kb) 121
122 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 120.313 kb on - strand, within PS417_00595 at 120.382 kb on - strand, within PS417_00595 at 120.382 kb on - strand, within PS417_00595 at 120.388 kb on + strand, within PS417_00595 at 120.389 kb on - strand, within PS417_00595 at 120.453 kb on + strand, within PS417_00595 at 120.454 kb on - strand, within PS417_00595 at 120.475 kb on + strand, within PS417_00595 at 120.476 kb on - strand, within PS417_00595 at 120.566 kb on - strand, within PS417_00595 at 121.470 kb on + strand, within PS417_00600 at 121.471 kb on - strand, within PS417_00600 at 121.471 kb on - strand, within PS417_00600 at 121.471 kb on - strand, within PS417_00600 at 121.538 kb on - strand, within PS417_00600 at 121.538 kb on - strand, within PS417_00600 at 121.594 kb on + strand at 121.595 kb on - strand, within PS417_00600 at 121.643 kb on + strand, within PS417_00600 at 121.643 kb on + strand, within PS417_00600 at 121.643 kb on + strand, within PS417_00600 at 121.643 kb on + strand, within PS417_00600 at 121.643 kb on + strand, within PS417_00600 at 121.644 kb on - strand, within PS417_00600 at 121.644 kb on - strand, within PS417_00600 at 121.644 kb on - strand, within PS417_00600 at 121.691 kb on + strand, within PS417_00600 at 121.723 kb on + strand at 121.744 kb on + strand at 121.744 kb on + strand at 121.745 kb on - strand at 121.788 kb on + strand at 121.967 kb on + strand at 121.968 kb on - strand at 122.038 kb on - strand at 122.281 kb on + strand, within PS417_00605 at 122.364 kb on + strand, within PS417_00605 at 122.364 kb on + strand, within PS417_00605 at 122.364 kb on + strand, within PS417_00605 at 122.365 kb on - strand, within PS417_00605 at 122.365 kb on - strand, within PS417_00605 at 122.397 kb on - strand, within PS417_00605 at 122.404 kb on - strand, within PS417_00605 at 122.404 kb on - strand, within PS417_00605 at 122.404 kb on - strand, within PS417_00605 at 122.486 kb on + strand, within PS417_00605 at 122.486 kb on + strand, within PS417_00605 at 122.487 kb on - strand, within PS417_00605 at 122.540 kb on + strand, within PS417_00605 at 122.540 kb on + strand, within PS417_00605 at 122.541 kb on - strand, within PS417_00605 at 122.541 kb on - strand, within PS417_00605 at 122.541 kb on - strand, within PS417_00605 at 122.541 kb on - strand, within PS417_00605 at 122.541 kb on - strand, within PS417_00605 at 122.541 kb on - strand, within PS417_00605 at 122.563 kb on + strand, within PS417_00605 at 122.563 kb on + strand, within PS417_00605 at 122.564 kb on - strand, within PS417_00605 at 122.564 kb on - strand, within PS417_00605 at 122.567 kb on + strand, within PS417_00605 at 122.567 kb on + strand, within PS417_00605 at 122.601 kb on + strand, within PS417_00605 at 122.602 kb on - strand, within PS417_00605
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 120,313 - PS417_00595 0.51 -0.5 120,382 - PS417_00595 0.54 -0.6 120,382 - PS417_00595 0.54 -0.2 120,388 + PS417_00595 0.55 +0.8 120,389 - PS417_00595 0.55 -2.1 120,453 + PS417_00595 0.58 -2.1 120,454 - PS417_00595 0.58 +2.2 120,475 + PS417_00595 0.59 +0.4 120,476 - PS417_00595 0.59 -0.4 120,566 - PS417_00595 0.64 -1.1 121,470 + PS417_00600 0.40 +0.4 121,471 - PS417_00600 0.40 +0.9 121,471 - PS417_00600 0.40 +1.0 121,471 - PS417_00600 0.40 -0.1 121,538 - PS417_00600 0.55 +0.2 121,538 - PS417_00600 0.55 -0.4 121,594 + -0.8 121,595 - PS417_00600 0.67 -0.2 121,643 + PS417_00600 0.78 -0.6 121,643 + PS417_00600 0.78 +2.8 121,643 + PS417_00600 0.78 -1.1 121,643 + PS417_00600 0.78 +1.1 121,643 + PS417_00600 0.78 -0.7 121,644 - PS417_00600 0.78 +2.3 121,644 - PS417_00600 0.78 -0.6 121,644 - PS417_00600 0.78 +0.3 121,691 + PS417_00600 0.88 +0.4 121,723 + -1.6 121,744 + +0.2 121,744 + +2.0 121,745 - -1.5 121,788 + -0.4 121,967 + +0.1 121,968 - +0.4 122,038 - +0.1 122,281 + PS417_00605 0.15 +1.5 122,364 + PS417_00605 0.18 -3.2 122,364 + PS417_00605 0.18 -1.8 122,364 + PS417_00605 0.18 +1.0 122,365 - PS417_00605 0.18 +0.7 122,365 - PS417_00605 0.18 +0.0 122,397 - PS417_00605 0.19 -0.8 122,404 - PS417_00605 0.19 +1.2 122,404 - PS417_00605 0.19 +1.0 122,404 - PS417_00605 0.19 -0.1 122,486 + PS417_00605 0.21 -2.0 122,486 + PS417_00605 0.21 +0.8 122,487 - PS417_00605 0.21 +1.0 122,540 + PS417_00605 0.23 -1.0 122,540 + PS417_00605 0.23 -0.2 122,541 - PS417_00605 0.23 -0.4 122,541 - PS417_00605 0.23 +0.2 122,541 - PS417_00605 0.23 +5.3 122,541 - PS417_00605 0.23 +0.5 122,541 - PS417_00605 0.23 -0.8 122,541 - PS417_00605 0.23 +0.6 122,563 + PS417_00605 0.24 -0.1 122,563 + PS417_00605 0.24 +0.5 122,564 - PS417_00605 0.24 +0.4 122,564 - PS417_00605 0.24 +0.7 122,567 + PS417_00605 0.24 +0.4 122,567 + PS417_00605 0.24 +0.6 122,601 + PS417_00605 0.25 +0.7 122,602 - PS417_00605 0.25 -0.9
Or see this region's nucleotide sequence