Strain Fitness in Pseudomonas simiae WCS417 around PS417_06025

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,338,525	+		PS417_06020	0.43	-0.4
1,338,526	-		PS417_06020	0.43	-2.5
1,338,526	-		PS417_06020	0.43	-1.1
1,338,581	-		PS417_06020	0.48	+0.6
1,338,997	+		PS417_06020	0.80	+0.2
1,338,998	-		PS417_06020	0.80	+0.3
1,339,003	+		PS417_06020	0.81	+1.4
1,339,003	+		PS417_06020	0.81	-1.5
1,339,004	-		PS417_06020	0.81	-0.6
1,339,004	-		PS417_06020	0.81	+0.5
1,339,132	+				-0.6
1,339,133	-				+1.2
1,339,303	+				+1.4
1,339,304	-				-2.8
1,339,304	-				-1.8
1,339,304	-				+0.0
1,339,304	-				+0.5
1,339,304	-				+0.0
1,339,305	+				+0.4
1,339,305	+				+0.1
1,339,305	+				+0.3
1,339,305	+				-1.8
1,339,305	+				-2.0
1,339,305	+				-2.4
1,339,305	+				-0.2
1,339,305	+				-3.4
1,339,305	+				-0.9
1,339,306	-				-1.6
1,339,306	-				-0.3
1,339,306	-				-1.2
1,339,306	-				-0.6
1,339,306	-				-2.7
1,339,306	-				-0.8
1,339,306	-				+0.4
1,339,306	-				+0.1
1,339,306	-				-1.1
1,339,309	+				+2.6
1,339,309	+				+0.2
1,339,309	+				-2.5
1,339,309	+				+1.7
1,339,309	+				-2.1
1,339,309	+				+0.0
1,339,309	+				-1.4
1,339,310	-				+1.0
1,339,310	-				+0.1
1,339,310	-				+3.1
1,339,310	-				+2.3
1,339,310	-				+1.4
1,339,310	-				-1.0
1,339,310	-				+0.7
1,339,310	-				-0.9
1,339,310	-				-0.3
1,339,385	+				+0.2
1,339,386	-				-0.1
1,339,389	-				+2.4
1,339,433	+				-1.4
1,339,516	+		PS417_06025	0.12	+2.0
1,339,711	+		PS417_06025	0.34	-3.5
1,339,751	-		PS417_06025	0.38	-2.1
1,339,859	-		PS417_06025	0.50	-3.5
1,339,859	-		PS417_06025	0.50	-3.2
1,339,938	-		PS417_06025	0.59	-3.4
1,339,938	-		PS417_06025	0.59	-0.5
1,340,269	+				-1.3
1,340,270	-				+0.3
1,340,280	+				+0.3
1,340,389	-		PS417_06030	0.25	+0.2
1,340,389	-		PS417_06030	0.25	+0.8
1,340,394	+		PS417_06030	0.27	-1.5
1,340,473	-		PS417_06030	0.51	+0.4
1,340,473	-		PS417_06030	0.51	+1.2
1,340,687	+				-1.8
1,340,800	-				+1.9
1,340,800	-				-0.4
1,340,800	-				-2.3
1,340,800	-				+0.7
1,340,800	-				+2.0
1,340,802	-				+1.2
1,340,810	+				+1.6
1,340,915	+		PS417_06035	0.33	+0.6
1,340,927	+		PS417_06035	0.36	-2.3
1,341,201	-				+0.4
1,341,201	-				-1.6
1,341,288	+				-0.8
1,341,289	-				-1.8
1,341,289	-				+1.2
1,341,300	-				+0.5