Strain Fitness in Pseudomonas simiae WCS417 around PS417_05945

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,320,597	+		PS417_05940	0.21	+0.4
1,320,597	+		PS417_05940	0.21	-1.8
1,320,667	+		PS417_05940	0.28	-0.8
1,320,865	-		PS417_05940	0.45	-2.6
1,320,907	-		PS417_05940	0.48	-1.8
1,320,927	+		PS417_05940	0.50	-2.7
1,320,928	-		PS417_05940	0.50	+1.2
1,320,943	-		PS417_05940	0.51	-1.6
1,321,045	-		PS417_05940	0.60	+1.4
1,321,045	-		PS417_05940	0.60	+1.1
1,321,084	-		PS417_05940	0.64	+0.1
1,321,084	-		PS417_05940	0.64	-0.3
1,321,519	+				-0.4
1,321,523	+				+0.3
1,321,523	+				+0.7
1,321,524	-				-0.1
1,321,524	-				-0.5
1,321,563	+				-1.0
1,321,907	-		PS417_05945	0.23	-0.4
1,321,933	-		PS417_05945	0.25	-0.8
1,321,935	+				+1.2
1,321,935	+		PS417_05945	0.25	-0.1
1,321,936	-		PS417_05945	0.25	-0.2
1,321,936	-		PS417_05945	0.25	+0.5
1,321,936	-		PS417_05945	0.25	-0.2
1,322,151	+		PS417_05945	0.40	-0.4
1,322,190	+		PS417_05945	0.42	-0.1
1,322,191	-		PS417_05945	0.42	+0.3
1,322,509	+		PS417_05945	0.64	-0.4
1,322,509	+		PS417_05945	0.64	+0.8
1,322,509	+		PS417_05945	0.64	-1.1
1,322,509	+		PS417_05945	0.64	-0.7
1,322,509	+		PS417_05945	0.64	-2.2
1,322,510	-		PS417_05945	0.64	-2.8
1,322,563	-		PS417_05945	0.68	-0.1
1,322,635	-		PS417_05945	0.73	+0.4
1,322,773	-		PS417_05945	0.82	+0.1
1,322,840	-		PS417_05945	0.87	-0.4
1,323,073	+				-0.2
1,323,074	-				+1.5
1,323,074	-				-1.6
1,323,074	-				-2.9
1,323,113	+				-0.5
1,323,113	+				-4.0
1,323,170	+				+2.5
1,323,309	-		PS417_05950	0.16	+1.4
1,323,402	-		PS417_05950	0.26	+1.3
1,323,528	-				-1.4
1,323,528	-		PS417_05950	0.40	-2.5
1,323,528	-		PS417_05950	0.40	-0.5
1,323,680	+		PS417_05950	0.56	-0.6
1,323,681	-		PS417_05950	0.57	+0.4
1,323,683	-		PS417_05950	0.57	-3.1
1,323,719	+		PS417_05950	0.61	+0.5