Strain Fitness in Pseudomonas simiae WCS417 around PS417_00570

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
112,610	-		PS417_00560	0.61	-0.8
112,621	+		PS417_00560	0.62	+2.5
112,622	-		PS417_00560	0.62	-3.0
112,682	+		PS417_00560	0.66	-1.1
112,682	+		PS417_00560	0.66	-2.5
112,683	-		PS417_00560	0.66	+0.8
112,698	+		PS417_00560	0.67	-0.6
112,913	-		PS417_00560	0.82	-0.1
112,970	+		PS417_00560	0.86	-2.9
112,970	+		PS417_00560	0.86	+0.4
112,971	-		PS417_00560	0.86	-0.1
112,971	-		PS417_00560	0.86	+0.9
113,007	+		PS417_00560	0.89	-0.0
113,008	-		PS417_00560	0.89	-2.5
113,008	-		PS417_00560	0.89	+0.0
113,009	+		PS417_00560	0.89	-3.0
113,009	+		PS417_00560	0.89	+0.5
113,010	-		PS417_00560	0.89	+1.3
113,028	+				-1.0
113,138	+				-2.4
113,167	+				-0.6
113,167	+				-2.3
113,167	+				+0.1
113,168	-				-1.5
113,168	-				+0.4
113,171	+				-0.0
113,172	-				-3.8
113,428	+		PS417_00565	0.82	-3.2
113,428	+		PS417_00565	0.82	+1.0
113,429	-		PS417_00565	0.82	-1.7
113,429	-		PS417_00565	0.82	-0.0
113,429	-		PS417_00565	0.82	-0.5
113,459	-				-1.3
113,459	-				-3.6
113,459	-				-0.2
113,459	-				+0.4
113,459	-				-0.4
113,474	+				-0.5
113,475	-				-0.2
113,635	+		PS417_00570	0.12	+0.2
113,936	-		PS417_00570	0.39	-0.4
114,170	+		PS417_00570	0.60	-2.1
114,211	+		PS417_00570	0.63	+0.4
114,476	-		PS417_00570	0.87	-2.7
114,519	+				-0.3
114,520	-				+0.6
114,780	+				+0.7
114,781	-				-0.5
114,804	+				+1.2
114,868	-				+1.2
114,916	-				-1.0
114,933	+				+0.3
114,933	+				+1.0
114,933	+				-2.0
114,934	-				+1.1
114,934	-				+0.3
114,934	-				-0.6
114,953	-				-0.6
114,968	+				+2.0
115,013	+				+0.8
115,013	+				-0.5
115,014	-				+1.6
115,014	-				-2.3
115,014	-				-2.6
115,060	-				-3.0
115,077	+				-2.1
115,077	+				+1.3
115,078	-				-0.6
115,081	+				-0.2
115,081	+				+0.7
115,081	+				-1.0
115,082	-				-0.2
115,082	-				-0.8
115,085	-				-0.8
115,173	+		PS417_00575	0.11	+0.3
115,173	+		PS417_00575	0.11	-2.7
115,173	+		PS417_00575	0.11	-0.8
115,174	-		PS417_00575	0.11	-1.1
115,176	+		PS417_00575	0.11	-1.0
115,176	+		PS417_00575	0.11	+1.0
115,177	-		PS417_00575	0.11	+1.0
115,177	-		PS417_00575	0.11	+0.8
115,310	+		PS417_00575	0.26	-1.1
115,311	-		PS417_00575	0.26	+0.9
115,311	-		PS417_00575	0.26	-0.1
115,344	-		PS417_00575	0.30	-2.0
115,383	+		PS417_00575	0.34	+3.3
115,384	-		PS417_00575	0.34	+0.1
115,540	-		PS417_00575	0.52	-3.3
115,540	-		PS417_00575	0.52	+0.7
115,543	+		PS417_00575	0.52	-0.6
115,544	-		PS417_00575	0.52	-0.1
115,601	+		PS417_00575	0.58	+1.1