Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4508 and Echvi_4509 are separated by 1 nucleotides Echvi_4509 and Echvi_4510 are separated by 12 nucleotides
Echvi_4508: Echvi_4508 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 5,383,912 to 5,384,931
_4508
Echvi_4509: Echvi_4509 - Zn-dependent hydrolases, including glyoxylases, at 5,384,933 to 5,385,763
_4509
Echvi_4510: Echvi_4510 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 5,385,776 to 5,386,987
_4510
Position (kb)
5384
5385
5386 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5383.993 kb on - strand at 5383.994 kb on + strand at 5383.995 kb on - strand at 5383.995 kb on - strand at 5384.008 kb on + strand at 5384.009 kb on - strand at 5384.075 kb on - strand, within Echvi_4508 at 5384.075 kb on - strand, within Echvi_4508 at 5384.076 kb on + strand, within Echvi_4508 at 5384.077 kb on - strand, within Echvi_4508 at 5384.186 kb on + strand, within Echvi_4508 at 5384.186 kb on + strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.275 kb on - strand, within Echvi_4508 at 5384.299 kb on - strand, within Echvi_4508 at 5384.374 kb on - strand, within Echvi_4508 at 5384.382 kb on + strand, within Echvi_4508 at 5384.393 kb on - strand, within Echvi_4508 at 5384.464 kb on + strand, within Echvi_4508 at 5384.465 kb on - strand, within Echvi_4508 at 5384.509 kb on + strand, within Echvi_4508 at 5384.527 kb on + strand, within Echvi_4508 at 5384.528 kb on - strand, within Echvi_4508 at 5384.542 kb on + strand, within Echvi_4508 at 5384.542 kb on + strand, within Echvi_4508 at 5384.584 kb on + strand, within Echvi_4508 at 5384.585 kb on - strand, within Echvi_4508 at 5384.681 kb on - strand, within Echvi_4508 at 5384.681 kb on - strand, within Echvi_4508 at 5384.759 kb on + strand, within Echvi_4508 at 5384.844 kb on - strand at 5384.929 kb on + strand at 5384.941 kb on + strand at 5384.942 kb on - strand at 5384.952 kb on + strand at 5384.953 kb on - strand at 5384.953 kb on - strand at 5384.958 kb on + strand at 5384.959 kb on - strand at 5385.008 kb on - strand at 5385.026 kb on + strand, within Echvi_4509 at 5385.026 kb on + strand, within Echvi_4509 at 5385.027 kb on - strand, within Echvi_4509 at 5385.027 kb on - strand, within Echvi_4509 at 5385.027 kb on - strand, within Echvi_4509 at 5385.047 kb on + strand, within Echvi_4509 at 5385.047 kb on + strand, within Echvi_4509 at 5385.048 kb on - strand, within Echvi_4509 at 5385.048 kb on - strand, within Echvi_4509 at 5385.056 kb on + strand, within Echvi_4509 at 5385.059 kb on + strand, within Echvi_4509 at 5385.059 kb on + strand, within Echvi_4509 at 5385.060 kb on - strand, within Echvi_4509 at 5385.060 kb on - strand, within Echvi_4509 at 5385.142 kb on + strand, within Echvi_4509 at 5385.161 kb on + strand, within Echvi_4509 at 5385.168 kb on + strand, within Echvi_4509 at 5385.168 kb on + strand, within Echvi_4509 at 5385.169 kb on - strand, within Echvi_4509 at 5385.170 kb on + strand, within Echvi_4509 at 5385.178 kb on + strand, within Echvi_4509 at 5385.193 kb on + strand, within Echvi_4509 at 5385.194 kb on - strand, within Echvi_4509 at 5385.206 kb on - strand, within Echvi_4509 at 5385.212 kb on + strand, within Echvi_4509 at 5385.212 kb on + strand, within Echvi_4509 at 5385.244 kb on + strand, within Echvi_4509 at 5385.244 kb on + strand, within Echvi_4509 at 5385.244 kb on + strand, within Echvi_4509 at 5385.245 kb on - strand, within Echvi_4509 at 5385.245 kb on - strand, within Echvi_4509 at 5385.245 kb on - strand, within Echvi_4509 at 5385.286 kb on - strand, within Echvi_4509 at 5385.286 kb on - strand, within Echvi_4509 at 5385.313 kb on + strand, within Echvi_4509 at 5385.344 kb on - strand, within Echvi_4509 at 5385.344 kb on - strand, within Echvi_4509 at 5385.353 kb on + strand, within Echvi_4509 at 5385.354 kb on - strand, within Echvi_4509 at 5385.359 kb on + strand, within Echvi_4509 at 5385.360 kb on - strand, within Echvi_4509 at 5385.413 kb on - strand, within Echvi_4509 at 5385.454 kb on - strand, within Echvi_4509 at 5385.454 kb on - strand, within Echvi_4509 at 5385.456 kb on - strand, within Echvi_4509 at 5385.462 kb on - strand, within Echvi_4509 at 5385.462 kb on - strand, within Echvi_4509 at 5385.462 kb on - strand, within Echvi_4509 at 5385.588 kb on + strand, within Echvi_4509 at 5385.609 kb on - strand, within Echvi_4509 at 5385.629 kb on - strand, within Echvi_4509 at 5385.684 kb on - strand at 5385.701 kb on + strand at 5385.702 kb on - strand at 5385.719 kb on - strand at 5385.719 kb on - strand at 5385.793 kb on + strand at 5385.876 kb on + strand at 5385.953 kb on + strand, within Echvi_4510 at 5385.955 kb on + strand, within Echvi_4510 at 5385.956 kb on - strand, within Echvi_4510 at 5386.080 kb on + strand, within Echvi_4510 at 5386.101 kb on + strand, within Echvi_4510 at 5386.102 kb on - strand, within Echvi_4510 at 5386.228 kb on + strand, within Echvi_4510 at 5386.228 kb on + strand, within Echvi_4510 at 5386.228 kb on + strand, within Echvi_4510 at 5386.229 kb on - strand, within Echvi_4510 at 5386.229 kb on - strand, within Echvi_4510 at 5386.371 kb on + strand, within Echvi_4510 at 5386.371 kb on + strand, within Echvi_4510 at 5386.412 kb on + strand, within Echvi_4510 at 5386.498 kb on - strand, within Echvi_4510 at 5386.633 kb on - strand, within Echvi_4510
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 5,383,993 - +0.2 5,383,994 + -0.5 5,383,995 - +0.3 5,383,995 - +0.4 5,384,008 + -2.6 5,384,009 - +1.4 5,384,075 - Echvi_4508 0.16 +0.3 5,384,075 - Echvi_4508 0.16 +0.4 5,384,076 + Echvi_4508 0.16 -1.2 5,384,077 - Echvi_4508 0.16 +0.1 5,384,186 + Echvi_4508 0.27 +2.7 5,384,186 + Echvi_4508 0.27 +1.4 5,384,187 - Echvi_4508 0.27 +1.6 5,384,187 - Echvi_4508 0.27 +1.2 5,384,187 - Echvi_4508 0.27 +0.3 5,384,187 - Echvi_4508 0.27 -0.4 5,384,275 - Echvi_4508 0.36 +0.7 5,384,299 - Echvi_4508 0.38 +0.8 5,384,374 - Echvi_4508 0.45 -1.4 5,384,382 + Echvi_4508 0.46 -0.6 5,384,393 - Echvi_4508 0.47 +2.1 5,384,464 + Echvi_4508 0.54 -2.2 5,384,465 - Echvi_4508 0.54 -0.2 5,384,509 + Echvi_4508 0.59 +1.1 5,384,527 + Echvi_4508 0.60 +0.6 5,384,528 - Echvi_4508 0.60 -1.5 5,384,542 + Echvi_4508 0.62 +0.9 5,384,542 + Echvi_4508 0.62 -1.9 5,384,584 + Echvi_4508 0.66 -0.4 5,384,585 - Echvi_4508 0.66 +1.2 5,384,681 - Echvi_4508 0.75 +0.4 5,384,681 - Echvi_4508 0.75 +1.0 5,384,759 + Echvi_4508 0.83 -3.0 5,384,844 - +1.4 5,384,929 + -2.1 5,384,941 + -0.1 5,384,942 - +0.2 5,384,952 + -1.1 5,384,953 - +0.0 5,384,953 - -1.2 5,384,958 + -1.2 5,384,959 - +1.0 5,385,008 - -1.6 5,385,026 + Echvi_4509 0.11 +0.7 5,385,026 + Echvi_4509 0.11 -2.9 5,385,027 - Echvi_4509 0.11 -0.3 5,385,027 - Echvi_4509 0.11 -1.2 5,385,027 - Echvi_4509 0.11 +0.8 5,385,047 + Echvi_4509 0.14 +0.5 5,385,047 + Echvi_4509 0.14 +0.5 5,385,048 - Echvi_4509 0.14 +0.2 5,385,048 - Echvi_4509 0.14 -0.9 5,385,056 + Echvi_4509 0.15 +1.4 5,385,059 + Echvi_4509 0.15 +1.9 5,385,059 + Echvi_4509 0.15 +1.7 5,385,060 - Echvi_4509 0.15 +0.3 5,385,060 - Echvi_4509 0.15 +1.3 5,385,142 + Echvi_4509 0.25 +0.5 5,385,161 + Echvi_4509 0.27 +1.3 5,385,168 + Echvi_4509 0.28 +1.3 5,385,168 + Echvi_4509 0.28 -0.2 5,385,169 - Echvi_4509 0.28 +3.1 5,385,170 + Echvi_4509 0.29 -2.0 5,385,178 + Echvi_4509 0.29 +0.8 5,385,193 + Echvi_4509 0.31 -0.5 5,385,194 - Echvi_4509 0.31 +0.1 5,385,206 - Echvi_4509 0.33 -0.7 5,385,212 + Echvi_4509 0.34 +0.7 5,385,212 + Echvi_4509 0.34 +3.1 5,385,244 + Echvi_4509 0.37 -1.2 5,385,244 + Echvi_4509 0.37 +0.6 5,385,244 + Echvi_4509 0.37 -0.6 5,385,245 - Echvi_4509 0.38 +1.4 5,385,245 - Echvi_4509 0.38 +1.8 5,385,245 - Echvi_4509 0.38 -0.7 5,385,286 - Echvi_4509 0.42 -1.1 5,385,286 - Echvi_4509 0.42 -0.9 5,385,313 + Echvi_4509 0.46 +1.0 5,385,344 - Echvi_4509 0.49 +0.5 5,385,344 - Echvi_4509 0.49 +0.1 5,385,353 + Echvi_4509 0.51 +1.4 5,385,354 - Echvi_4509 0.51 -1.4 5,385,359 + Echvi_4509 0.51 -0.5 5,385,360 - Echvi_4509 0.51 -0.3 5,385,413 - Echvi_4509 0.58 -1.9 5,385,454 - Echvi_4509 0.63 +0.2 5,385,454 - Echvi_4509 0.63 +0.6 5,385,456 - Echvi_4509 0.63 +0.0 5,385,462 - Echvi_4509 0.64 +1.4 5,385,462 - Echvi_4509 0.64 +0.9 5,385,462 - Echvi_4509 0.64 +0.2 5,385,588 + Echvi_4509 0.79 +0.9 5,385,609 - Echvi_4509 0.81 -0.3 5,385,629 - Echvi_4509 0.84 -0.5 5,385,684 - -1.7 5,385,701 + -1.1 5,385,702 - -1.8 5,385,719 - -3.1 5,385,719 - +0.5 5,385,793 + +0.9 5,385,876 + -1.2 5,385,953 + Echvi_4510 0.15 +3.2 5,385,955 + Echvi_4510 0.15 +0.0 5,385,956 - Echvi_4510 0.15 -0.4 5,386,080 + Echvi_4510 0.25 -0.7 5,386,101 + Echvi_4510 0.27 +1.3 5,386,102 - Echvi_4510 0.27 +0.9 5,386,228 + Echvi_4510 0.37 -0.9 5,386,228 + Echvi_4510 0.37 +0.3 5,386,228 + Echvi_4510 0.37 +0.8 5,386,229 - Echvi_4510 0.37 -2.4 5,386,229 - Echvi_4510 0.37 -0.2 5,386,371 + Echvi_4510 0.49 +0.9 5,386,371 + Echvi_4510 0.49 -1.7 5,386,412 + Echvi_4510 0.52 +1.6 5,386,498 - Echvi_4510 0.60 +1.5 5,386,633 - Echvi_4510 0.71 +0.5
Or see this region's nucleotide sequence